Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq32 149 5e-31 >seq32 Length=1561830 Score = 149 bits (164), Expect = 5e-31 Identities = 302/441 (68%), Gaps = 12/441 (3%) Strand=Plus/Plus Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407 || || ||| | | ||| || || ||| ||| ||||||||||| || ||| || | || Sbjct 1152194 GGTCTCTTGTTGTTTGGTCCTCCAGGTACTGGTAAAACATTAATCGCAAGAAAAATCGGT 1152253 Query 19408 AAATTACTTACAAAACAACCTCCCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATA 19466 | | | | | | ||| ||||| ||||| || ||||| |||||| | | |||||| Sbjct 1152254 ACAATGTTGA-ATGCCAAAGAGCCAAAGATTGTTAACGGTCCAGAAATCCTCAGTAAATA 1152312 Query 19467 TGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAA 19526 ||| || || ||||||||| | || ||||| || ||||| | |||| | || Sbjct 1152313 TGTCGGCTCTTCAGAAGAAAATATCCGTAACTTGTTCAAGGATGCTGAGGCAGAATATAA 1152372 Query 19527 ACGTTTAGGGCGCAAAAG-TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCT 19585 | |||| | | || ||| ||||||||||| || | ||||||||||| | | | Sbjct 1152373 T-GCCAAGGGTGAAGAATCTTCATTGCACATTATCATTTTCGATGAATTGGATTCTGTAT 1152431 Query 19586 GTAAGCAAAGAGGTTC---TGGT----GTAAATGGAGTACATGACACTGTTGTCAATCAA 19638 |||||||||||||| ||| ||| | || || |||| ||| || || ||| Sbjct 1152432 TCAAGCAAAGAGGTTCAAGAGGTGACGGTACA-GGCGTTGGAGACAATGTGGTTAACCAA 1152490 Query 19639 CTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACT 19698 | || | || | || |||||| ||||| | || ||||| || |||||||| |||||| Sbjct 1152491 TTGCTTGCTAAGATGGATGGTGTTGACCAATTAAACAATATATTGGTTATTGGTATGACT 1152550 Query 19699 AATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATC 19758 || | ||| || || || || ||||| ||||| || ||| | || ||| | || || Sbjct 1152551 AACCGTAAGGATTTGATTGATAGTGCCTTGTTACGTCCTGGTAGATTTGAAGTCCAGGTC 1152610 Query 19759 GAAATTAACTTACCCGATGAA 19779 |||||| | ||||| || ||| Sbjct 1152611 GAAATTCAATTACCAGACGAA 1152631 Score = 118 bits (130), Expect = 8e-22 Identities = 560/866 (65%), Gaps = 38/866 (4%) Strand=Plus/Plus Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767 ||||| | |||| || || || || ||| | || || | ||| |||| || ||||| Sbjct 411060 TTTCCCAATCAAGTACCACGAAATCTGGGAGGCTTATAAGAGAGCCGAGGCCTCTTTTTG 411119 Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGCATTAAAACCA 43825 ||| || |||||| | |||||| | || || ||| || | |||| || | || | Sbjct 411120 GACTGCTGAAGAAATCGATTTGTCCAAGGATCTT--CATGACTGGAA--CAACAGAATGA 411175 Query 43826 -CAAGAA--AAACATTTTATATCTTTGGTTT--TGGCGTTTTTTGCTGCGAGCGACGGGA 43880 | |||| | | ||||| |||| | | | ||||| |||||||| ||| || | Sbjct 411176 ACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTCTTTGCTGCTTCCGATGGTA 411235 Query 43881 TAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGAT 43940 | || || ||||| ||||| || | || || ||| | |||||||| | Sbjct 411236 TCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTGCAAATTCCAGAAGCCAAGT 411295 Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000 |||| || || || |||||| || ||||| ||||| || |||| || | ||| Sbjct 411296 GTTTCTACGGTTTCCAAATTATGATGGAAAACATTCACTCCGAAACTTATTCGTTGTTGA 411355 Query 44001 TAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056 | || || |||||||| ||| || || || | || ||||| ||||| || ||| Sbjct 411356 TTGACACTTACATCAAGGATCCTAAGGAACACGA--CTTC--TTGTTGAATGCCATTGAA 411411 Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGAT 44116 || | || || ||| | || || | |||||| ||| |||||| | | || Sbjct 411412 ACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGGATTCGTGATGACGAA 411471 Query 44117 TCTTTT---GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173 | | | ||| || | || ||||| || | |||||||| | || || || || Sbjct 411472 GCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGT 411531 Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233 || ||||| ||||| || ||||| ||||| ||||||||||| || ||||| || ||| Sbjct 411532 TCCTTTGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCA 411591 Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293 || || || || | | |||||||| || || ||| ||||| || ||| || || | Sbjct 411592 AACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTA-TTCCA 411650 Query 44294 TATCTAGGAGACGATAAGCC---TTCATGTAAGACAAT-TACAGATATTGTTGTAGAGGC 44349 | | | ||| | ||||| | || |||| | | ||| || | ||| || Sbjct 411651 TCATTTGAAGA--ACAAGCCAGATCCA---AAGATTGTCGAAAGA-ATCATCACAGAAGC 411704 Query 44350 AGTAAAGATAGAACAAGA-ATTTATGA-CAACAGCATTACCTGTAAATTTAATAGGAATG 44407 || |||| ||| |||| || | | | || || |||| || | || | || ||| Sbjct 411705 TGTTGAGATCGAA-AAGAGATACTTCATCGAC-GCTCTACCCGTTTCTCTATTGGGTATG 411762 Query 44408 AATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTG 44467 || | ||||||||||||||| | |||| ||||||| | |||| | | | Sbjct 411763 AACGCTGATTTGATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTA 411822 Query 44468 GGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTG 44527 ||| | | ||| |||| | || ||||| || || ||||||||||| ||||| ||| Sbjct 411823 GGTAACAAGAAATACTACAACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTG 411882 Query 44528 GAAGGCAAAACAAACTTTTTTGAAAA 44553 | || ||||| || || || ||||| Sbjct 411883 GCCGGTAAAACCAATTTCTTCGAAAA 411908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455825616180