Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq32 149 5e-31
>seq32
Length=1561830
Score = 149 bits (164), Expect = 5e-31
Identities = 302/441 (68%), Gaps = 12/441 (3%)
Strand=Plus/Plus
Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407
|| || ||| | | ||| || || ||| ||| ||||||||||| || ||| || | ||
Sbjct 1152194 GGTCTCTTGTTGTTTGGTCCTCCAGGTACTGGTAAAACATTAATCGCAAGAAAAATCGGT 1152253
Query 19408 AAATTACTTACAAAACAACCTCCCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATA 19466
| | | | | | ||| ||||| ||||| || ||||| |||||| | | ||||||
Sbjct 1152254 ACAATGTTGA-ATGCCAAAGAGCCAAAGATTGTTAACGGTCCAGAAATCCTCAGTAAATA 1152312
Query 19467 TGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAA 19526
||| || || ||||||||| | || ||||| || ||||| | |||| | ||
Sbjct 1152313 TGTCGGCTCTTCAGAAGAAAATATCCGTAACTTGTTCAAGGATGCTGAGGCAGAATATAA 1152372
Query 19527 ACGTTTAGGGCGCAAAAG-TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCT 19585
| |||| | | || ||| ||||||||||| || | ||||||||||| | | |
Sbjct 1152373 T-GCCAAGGGTGAAGAATCTTCATTGCACATTATCATTTTCGATGAATTGGATTCTGTAT 1152431
Query 19586 GTAAGCAAAGAGGTTC---TGGT----GTAAATGGAGTACATGACACTGTTGTCAATCAA 19638
|||||||||||||| ||| ||| | || || |||| ||| || || |||
Sbjct 1152432 TCAAGCAAAGAGGTTCAAGAGGTGACGGTACA-GGCGTTGGAGACAATGTGGTTAACCAA 1152490
Query 19639 CTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACT 19698
| || | || | || |||||| ||||| | || ||||| || |||||||| ||||||
Sbjct 1152491 TTGCTTGCTAAGATGGATGGTGTTGACCAATTAAACAATATATTGGTTATTGGTATGACT 1152550
Query 19699 AATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATC 19758
|| | ||| || || || || ||||| ||||| || ||| | || ||| | || ||
Sbjct 1152551 AACCGTAAGGATTTGATTGATAGTGCCTTGTTACGTCCTGGTAGATTTGAAGTCCAGGTC 1152610
Query 19759 GAAATTAACTTACCCGATGAA 19779
|||||| | ||||| || |||
Sbjct 1152611 GAAATTCAATTACCAGACGAA 1152631
Score = 118 bits (130), Expect = 8e-22
Identities = 560/866 (65%), Gaps = 38/866 (4%)
Strand=Plus/Plus
Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767
||||| | |||| || || || || ||| | || || | ||| |||| || |||||
Sbjct 411060 TTTCCCAATCAAGTACCACGAAATCTGGGAGGCTTATAAGAGAGCCGAGGCCTCTTTTTG 411119
Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGCATTAAAACCA 43825
||| || |||||| | |||||| | || || ||| || | |||| || | || |
Sbjct 411120 GACTGCTGAAGAAATCGATTTGTCCAAGGATCTT--CATGACTGGAA--CAACAGAATGA 411175
Query 43826 -CAAGAA--AAACATTTTATATCTTTGGTTT--TGGCGTTTTTTGCTGCGAGCGACGGGA 43880
| |||| | | ||||| |||| | | | ||||| |||||||| ||| || |
Sbjct 411176 ACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTCTTTGCTGCTTCCGATGGTA 411235
Query 43881 TAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGAT 43940
| || || ||||| ||||| || | || || ||| | |||||||| |
Sbjct 411236 TCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTGCAAATTCCAGAAGCCAAGT 411295
Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000
|||| || || || |||||| || ||||| ||||| || |||| || | |||
Sbjct 411296 GTTTCTACGGTTTCCAAATTATGATGGAAAACATTCACTCCGAAACTTATTCGTTGTTGA 411355
Query 44001 TAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056
| || || |||||||| ||| || || || | || ||||| ||||| || |||
Sbjct 411356 TTGACACTTACATCAAGGATCCTAAGGAACACGA--CTTC--TTGTTGAATGCCATTGAA 411411
Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGAT 44116
|| | || || ||| | || || | |||||| ||| |||||| | | ||
Sbjct 411412 ACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGGATTCGTGATGACGAA 411471
Query 44117 TCTTTT---GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173
| | | ||| || | || ||||| || | |||||||| | || || || ||
Sbjct 411472 GCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGT 411531
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|| ||||| ||||| || ||||| ||||| ||||||||||| || ||||| || |||
Sbjct 411532 TCCTTTGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCA 411591
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
|| || || || | | |||||||| || || ||| ||||| || ||| || || |
Sbjct 411592 AACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTA-TTCCA 411650
Query 44294 TATCTAGGAGACGATAAGCC---TTCATGTAAGACAAT-TACAGATATTGTTGTAGAGGC 44349
| | | ||| | ||||| | || |||| | | ||| || | ||| ||
Sbjct 411651 TCATTTGAAGA--ACAAGCCAGATCCA---AAGATTGTCGAAAGA-ATCATCACAGAAGC 411704
Query 44350 AGTAAAGATAGAACAAGA-ATTTATGA-CAACAGCATTACCTGTAAATTTAATAGGAATG 44407
|| |||| ||| |||| || | | | || || |||| || | || | || |||
Sbjct 411705 TGTTGAGATCGAA-AAGAGATACTTCATCGAC-GCTCTACCCGTTTCTCTATTGGGTATG 411762
Query 44408 AATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTG 44467
|| | ||||||||||||||| | |||| ||||||| | |||| | | |
Sbjct 411763 AACGCTGATTTGATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTA 411822
Query 44468 GGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTG 44527
||| | | ||| |||| | || ||||| || || ||||||||||| ||||| |||
Sbjct 411823 GGTAACAAGAAATACTACAACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTG 411882
Query 44528 GAAGGCAAAACAAACTTTTTTGAAAA 44553
| || ||||| || || || |||||
Sbjct 411883 GCCGGTAAAACCAATTTCTTCGAAAA 411908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455825616180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |