Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq33 91.5 1e-13 >seq33 Length=1695378 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| | ||| || || || | ||||| || |||||||| ||||||||| Sbjct 914166 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 914107 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | ||||||| | |||||||| || |||| | | ||||| || || || Sbjct 914106 AGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 914047 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| || || || ||||| |||| | || | |||||| | | ||||||| Sbjct 914046 ATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACT 913987 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| || | |||||| |||| ||| || || |||||||||||| Sbjct 913986 TCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCATA 913939 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| | ||| || || || | ||||| || |||||||| ||||||||| Sbjct 914394 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 914335 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | ||||||| | |||||||| || |||| | | ||||| || || || Sbjct 914334 AGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGA 914275 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| |||||||| ||||| |||| | || | |||||| | | ||| ||| Sbjct 914274 ATACCTTCTTTATCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACT 914215 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| |||| || || |||| ||| || || |||||||||||| Sbjct 914214 TCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 914167 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| | ||| || || || | ||||| || |||||||| ||||||||| Sbjct 914622 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 914563 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | ||||||| | |||||||| || |||| | | ||||| || || || Sbjct 914562 AGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGA 914503 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| |||||||| ||||| |||| | || | |||||| | | ||| ||| Sbjct 914502 ATACCTTCTTTATCTTGAATCTTAGACTTCACATTATCAATAGTGTCAGAAGATTCGACT 914443 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| |||| || || |||| ||| || || |||||||||||| Sbjct 914442 TCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 914395 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||||| ||| ||||| || | || || || ||||| || ||||||||| Sbjct 914850 CCTCCTCTCAACCTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGAT 914791 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | ||||||| | || ||||| || |||| | | ||||| || || || Sbjct 914790 AGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 914731 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| || || || ||||| |||| | || | |||||| | | ||| ||| Sbjct 914730 ATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACT 914671 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| |||| || || |||| ||| || || |||||||||||| Sbjct 914670 TCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 914623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934213560032