Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq2 316 3e-81
seq32 116 5e-21
>seq2
Length=945054
Score = 316 bits (350), Expect = 3e-81
Identities = 922/1399 (66%), Gaps = 43/1399 (3%)
Strand=Plus/Plus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| ||||| | |||||||| || || || || || | |||||||||||| | || ||
Sbjct 340052 GTACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGA 340111
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
|| ||||||||||| || | ||| | | ||| | ||||| | | |||||| |
Sbjct 340112 AGCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGC 340171
Query 110827 CTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTT-TCACCTTCCCACATGTCAAACTG 110883
||| | |||||| || ||| | || | || | | ||| ||| | || || ||
Sbjct 340172 CTTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTCTTACC---CCATAGATCGAATTG 340228
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943
| | |||| || || ||||| || || | |||||| | ||||| | | ||
Sbjct 340229 TAACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGC 340288
Query 110944 CAATTCACAGCTCGCCTC-CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002
|||||| | || || || | | | || || || ||||||||||| | | ||||
Sbjct 340289 CAATTCCATGGAGGCTTCACAAGCAC-CATGGTAGATAGTTTCAAAGATTTGGACGTTCA 340347
Query 111003 -TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061
|||| ||| |||| || || ||||||| | || || || || | || || | |
Sbjct 340348 ATCTCTTTG-CTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAA 340406
Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121
|||||||||||||| |||||||||| |||| ||| || || ||| ||||| |||||
Sbjct 340407 CCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACT 340466
Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181
|||||| | || | |||||||| || ||| | || || | || ||| | ||| ||
Sbjct 340467 GGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCG 340526
Query 111182 TG-AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT----TGACAT--------ACTT 111228
|| || || || | | | | || |||||| ||| ||| || ||
Sbjct 340527 TGCAACTTCTTGA-AGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGC 340585
Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288
||| | ||||| || ||||| || |||||||| || || || | | ||| || |
Sbjct 340586 TGGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAAC 340645
Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348
||||| ||| ||||| ||| ||| || || ||||| |||||||| |||||||||||
Sbjct 340646 GATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTT 340705
Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408
||| || ||||||||||| |||||| | || || || || || || || | || | ||
Sbjct 340706 GTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGAT 340765
Query 111409 AGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACT 111467
||| | ||| ||| | | | || | ||| | | | || || || ||||||
Sbjct 340766 AGCGTACCACAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGGCCTTCTCTCTCGTAAC 340824
Query 111468 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTG 111527
| ||| | |||||||| || ||||| | || | | |||||||| | || ||
Sbjct 340825 GTTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTG 340884
Query 111528 GACAGAAAAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585
|| |||| | || ||| | | | ||| ||| || | |||||||||||| ||||| ||
Sbjct 340885 GAGAGAACAAAGTCCAAT--CTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGAT 340942
Query 111586 CCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 111644
||| || | || || | |||| | ||| || ||||| | ||| ||||| || |
Sbjct 340943 CCATAGTGCTGGGAACAAGTCTCTTGCACGGA-TTTCTTCCTTACCGTGGTTCTTTCTGA 341001
Query 111645 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAG 111698
|| | ||| || | |||||| | |||||||||||| | || | |||| ||
Sbjct 341002 TGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAG 341061
Query 111699 ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758
|| ||| | ||| |||| | || || || || ||| ||| || || |||| ||
Sbjct 341062 GTCTCTTGTTA---CCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCA 341118
Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818
||||||||||||| | || ||| || || || ||| ||| | | | |
Sbjct 341119 TTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAA 341178
Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878
| || ||||||| |||||||| ||||| ||| ||||| ||||| ||| | |
Sbjct 341179 TGTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCA 341238
Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938
||| | || ||||| | || || || ||||| |||| | ||||| || ||||
Sbjct 341239 AAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACA 341298
Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 111998
| || || || |||||||||||||| || || || | ||||| |||| || |||
Sbjct 341299 TTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAA-GTATCTT 341357
Query 111999 -GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057
| ||||| || ||| || ||||| || ||||| ||| |||||||| ||||
Sbjct 341358 AGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACA 341417
Query 112058 GCGACCCGCATGAACATGT 112076
|| || | ||||| |||||
Sbjct 341418 GCCACTCTCATGATCATGT 341436
>seq32
Length=1561830
Score = 116 bits (128), Expect = 5e-21
Identities = 353/530 (67%), Gaps = 23/530 (4%)
Strand=Plus/Minus
Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717
|||||| || ||| | ||| ||||||| | |||| | ||| ||||||||| | |||
Sbjct 411636 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 411577
Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGA 122776
|||||| | |||| |||||||||||| | || || ||| || || || ||||| || |
Sbjct 411576 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCA-AAGGAACCAGAGAAAAACA 411518
Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATC- 122834
||| ||||| || ||||||| | | ||| ||| | || | ||| | ||||
Sbjct 411517 CACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA-TAG---GGCTTCGTCATCA 411462
Query 122835 --AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC- 122891
|| |||| | || ||||||| ||||| | | || ||| | |||| |||||
Sbjct 411461 CGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCA 411402
Query 122892 TTCA--AATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAA 122949
|||| || || | | | | || |||||| ||||| |||||||||| |||
Sbjct 411401 TTCAACAAGAAGTCGTGTTCCTTAG---GATCCTTGATGTAAGTGTCAATCAACAACGAA 411345
Query 122950 TATGTTTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTC 123008
|| |||||| |||| ||| ||| || ||| | ||||||| | |||||
Sbjct 411344 TAAGTTTCGGAGTGAATGTTTTCCATCAT-AATTTGGAAACCGTAGAAACACTTGGCTTC 411286
Query 123009 GCTTATCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGA 123068
|| || |||||| | | || || | | || || || || ||||||||
Sbjct 411285 TGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGA 411226
Query 123069 CCCAGCAAAGAATGCCAGGA---TGTACTTTATGAATTTCT-TTTCATTTTCATTCAGGG 123124
|||||||||| || || | || | | | ||| ||| ||| ||||||| |
Sbjct 411225 AGCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTC-TGT 411167
Query 123125 TCTTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCAA 123174
| |||||||| | |||||| ||||||||||| | |||||| |||||||||
Sbjct 411166 TGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAA 411117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031717385600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |