Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 170 2e-37
>seq2
Length=945054
Score = 170 bits (188), Expect = 2e-37
Identities = 506/770 (66%), Gaps = 14/770 (2%)
Strand=Plus/Plus
Query 79049 GGCACAGCGAT----GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATG 79104
|||| |||||| |||| ||| || || || || || || ||| |||| || | |
Sbjct 340587 GGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACG 340646
Query 79105 ATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCG 79164
||||| ||||| || || |||||||| || || | |||||| || || ||||||| |
Sbjct 340647 ATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTG 340706
Query 79165 TTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGA-CTCTTGAGAAC 79223
||||| || |||||||| |||| | || || || || || ||| || |||
Sbjct 340707 TTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATA 340766
Query 79224 GCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACC--GACCCTGTGCGACGTA- 79280
|| || ||| | | | ||| |||| ||| | |||| | || | | ||||
Sbjct 340767 GC-GTACCACAACTTTTGAGCCTTGACAGTCTT--TCTACCACGGCCTTCTCTCTCGTAA 340823
Query 79281 CGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTG 79340
||| || ||||| | | || | || || || ||||| || | ||| || ||||
Sbjct 340824 CGTTCG-TACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTT 340882
Query 79341 CGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGAT 79400
|| | | || ||| || |||| |||||| || ||| |||||| || || |||||
Sbjct 340883 TGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGAT 340942
Query 79401 CCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAG 79460
||| || || | ||| | ||| | ||| || || || | || |||||| | |
Sbjct 340943 CCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGAT 341002
Query 79461 CTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTT 79520
|||| ||||| | ||| || | |||||| ||||| | || | |||||| | |||
Sbjct 341003 GTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGG 341062
Query 79521 GCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGG 79580
| |||| || || |||| ||||| ||||| |||||||||||||| || | ||| ||
Sbjct 341063 TCTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGG 341122
Query 79581 CACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTT 79640
| || |||| | ||||| || || || | |||| | | ||||||||
Sbjct 341123 AATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTT 341182
Query 79641 CGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCG 79699
| | | ||| | || || || || | ||| ||||| || || ||||| | |
Sbjct 341183 -GTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAG 341241
Query 79700 TCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCT 79759
| ||||| || || || || || || |||||||| || || ||||| || ||||| |
Sbjct 341242 TGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTT 341301
Query 79760 GTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG 79809
|||| | ||||| || ||||| || || |||| ||||| ||||||
Sbjct 341302 GTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAG 341351
Score = 156 bits (172), Expect = 5e-33
Identities = 493/756 (65%), Gaps = 6/756 (1%)
Strand=Plus/Minus
Query 19195 CTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAG 19254
|||||| ||||| |||| || |||||||| || ||||| | || || |||||
Sbjct 341351 CTTCACACACGCTTCGCCTACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATC 341292
Query 19255 CTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGA 19314
|||||||||||||| |||||||| || |||||| || || ||||| || | |||||
Sbjct 341291 ATGTTTCCTAGTGGCCATGAAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGA 341232
Query 19315 GTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGT 19373
|| || ||||| ||| | || ||||| || | ||| | | | || || || |
Sbjct 341231 ATGTGCCATGATCTCTAAGACCGCTGGTGGTATTGGTTTGCACATTCAC-AACATTCGTT 341173
Query 19374 CGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCC 19433
| | ||| | || ||| || ||||| | ||||||| | |||||| | |
Sbjct 341172 CTACCGGTTCTTACATTGCTGGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTC 341113
Query 19434 GCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGT 19493
| || ||||||||||| ||| | ||||| |||| || || ||| | || | |
Sbjct 341112 GTGTTTTCAACAACACTGCCCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCT 341053
Query 19494 TCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGA 19553
||||| | ||| |||||||||||||| | || || | || ||| |||| | | ||
Sbjct 341052 TCGCCTTGTACATCGAGCCATGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGA 340993
Query 19554 ACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACC 19613
|||| ||| | || || || || | ||| | ||| | || | ||||| || || |
Sbjct 340992 ACCACGGTAAGGAAGAAATCCGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATC 340933
Query 19614 TATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCC 19673
| |||||| ||| || |||||| ||||||| ||| || | | || ||||| |
Sbjct 340932 TTTTCATGAAGAGAGTCGAGAAGAACGAAGATTGGACTTTGTTCTCTCCAAACGAAGCAC 340873
Query 19674 CTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTACCGGAC-TTACGTAGCC 19732
| ||| |||| || || ||||| || | || | | ||||| || || |||||
Sbjct 340872 CAGGCTTACCAGATGTTTACGGTGATGAATTTGAAGCATTGTA-CGAACGTTACGAGAGA 340814
Query 19733 CAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGC 19792
| ||||| | ||| ||| ||| | | | ||| | ||| || ||||
Sbjct 340813 GAAGGCCGTGGTAGAAAGACTGTCAAGGCTCAAAAGTTGTGGTA-CGCTATCTTGGAAGC 340755
Query 19793 -CAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAA 19851
|| ||| || || || || | |||| |||||||| || ||| ||| ||
Sbjct 340754 TCAAACCGAAACTGGTACCCCATTCATGCTATACAAGGATGCTTGTAACAAGAAGAGTAA 340695
Query 19852 TCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTC 19911
||| |||||| | || | |||||||| || ||| ||||| ||||||| | || ||
Sbjct 340694 TCAAAAGAACTTGGGTACTATCAAGTCTTCGAACTTGTGTTGTGAAATCGTTGAATACTC 340635
Query 19912 CAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTC 19947
|| || || || || || || ||||| |||| ||
Sbjct 340634 TAACCCAGAAGAAACCGCTGTTTGTAACTTGGCTTC 340599
Score = 89.7 bits (98), Expect = 6e-13
Identities = 141/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258
|||||||| || ||||| | |||||||||||||||||| | ||||| | || |||
Sbjct 339714 TAGTACATACCAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTA 339773
Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318
||| | | ||| ||| ||||| | ||| ||||| || ||||| || ||| |
Sbjct 339774 CCCATAGTTGGGGCACGAATGTGAATGTTCAACGATTGGGATTGATCGATATAAGCAGCA 339833
Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378
||||| || ||||| ||||| | |||||||| || ||||| | ||| ||| |
Sbjct 339834 CGGTCAGCGGCCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAA 339893
Query 78379 GCCTTCAGCTCTTCCTGGATGT 78400
| || ||||||| ||||||
Sbjct 339894 TCTTTTAGCTCTTGTGGGATGT 339915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524553163840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |