Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2 170 2e-37 >seq2 Length=945054 Score = 170 bits (188), Expect = 2e-37 Identities = 506/770 (66%), Gaps = 14/770 (2%) Strand=Plus/Plus Query 79049 GGCACAGCGAT----GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATG 79104 |||| |||||| |||| ||| || || || || || || ||| |||| || | | Sbjct 340587 GGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACG 340646 Query 79105 ATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCG 79164 ||||| ||||| || || |||||||| || || | |||||| || || ||||||| | Sbjct 340647 ATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTG 340706 Query 79165 TTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGA-CTCTTGAGAAC 79223 ||||| || |||||||| |||| | || || || || || ||| || ||| Sbjct 340707 TTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATA 340766 Query 79224 GCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACC--GACCCTGTGCGACGTA- 79280 || || ||| | | | ||| |||| ||| | |||| | || | | |||| Sbjct 340767 GC-GTACCACAACTTTTGAGCCTTGACAGTCTT--TCTACCACGGCCTTCTCTCTCGTAA 340823 Query 79281 CGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTG 79340 ||| || ||||| | | || | || || || ||||| || | ||| || |||| Sbjct 340824 CGTTCG-TACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTT 340882 Query 79341 CGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGAT 79400 || | | || ||| || |||| |||||| || ||| |||||| || || ||||| Sbjct 340883 TGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGAT 340942 Query 79401 CCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAG 79460 ||| || || | ||| | ||| | ||| || || || | || |||||| | | Sbjct 340943 CCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGAT 341002 Query 79461 CTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTT 79520 |||| ||||| | ||| || | |||||| ||||| | || | |||||| | ||| Sbjct 341003 GTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGG 341062 Query 79521 GCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGG 79580 | |||| || || |||| ||||| ||||| |||||||||||||| || | ||| || Sbjct 341063 TCTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGG 341122 Query 79581 CACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTT 79640 | || |||| | ||||| || || || | |||| | | |||||||| Sbjct 341123 AATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTT 341182 Query 79641 CGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCG 79699 | | | ||| | || || || || | ||| ||||| || || ||||| | | Sbjct 341183 -GTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAG 341241 Query 79700 TCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCT 79759 | ||||| || || || || || || |||||||| || || ||||| || ||||| | Sbjct 341242 TGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTT 341301 Query 79760 GTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG 79809 |||| | ||||| || ||||| || || |||| ||||| |||||| Sbjct 341302 GTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAG 341351 Score = 156 bits (172), Expect = 5e-33 Identities = 493/756 (65%), Gaps = 6/756 (1%) Strand=Plus/Minus Query 19195 CTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAG 19254 |||||| ||||| |||| || |||||||| || ||||| | || || ||||| Sbjct 341351 CTTCACACACGCTTCGCCTACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATC 341292 Query 19255 CTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGA 19314 |||||||||||||| |||||||| || |||||| || || ||||| || | ||||| Sbjct 341291 ATGTTTCCTAGTGGCCATGAAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGA 341232 Query 19315 GTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGT 19373 || || ||||| ||| | || ||||| || | ||| | | | || || || | Sbjct 341231 ATGTGCCATGATCTCTAAGACCGCTGGTGGTATTGGTTTGCACATTCAC-AACATTCGTT 341173 Query 19374 CGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCC 19433 | | ||| | || ||| || ||||| | ||||||| | |||||| | | Sbjct 341172 CTACCGGTTCTTACATTGCTGGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTC 341113 Query 19434 GCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGT 19493 | || ||||||||||| ||| | ||||| |||| || || ||| | || | | Sbjct 341112 GTGTTTTCAACAACACTGCCCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCT 341053 Query 19494 TCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGA 19553 ||||| | ||| |||||||||||||| | || || | || ||| |||| | | || Sbjct 341052 TCGCCTTGTACATCGAGCCATGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGA 340993 Query 19554 ACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACC 19613 |||| ||| | || || || || | ||| | ||| | || | ||||| || || | Sbjct 340992 ACCACGGTAAGGAAGAAATCCGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATC 340933 Query 19614 TATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCC 19673 | |||||| ||| || |||||| ||||||| ||| || | | || ||||| | Sbjct 340932 TTTTCATGAAGAGAGTCGAGAAGAACGAAGATTGGACTTTGTTCTCTCCAAACGAAGCAC 340873 Query 19674 CTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTACCGGAC-TTACGTAGCC 19732 | ||| |||| || || ||||| || | || | | ||||| || || ||||| Sbjct 340872 CAGGCTTACCAGATGTTTACGGTGATGAATTTGAAGCATTGTA-CGAACGTTACGAGAGA 340814 Query 19733 CAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGC 19792 | ||||| | ||| ||| ||| | | | ||| | ||| || |||| Sbjct 340813 GAAGGCCGTGGTAGAAAGACTGTCAAGGCTCAAAAGTTGTGGTA-CGCTATCTTGGAAGC 340755 Query 19793 -CAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAA 19851 || ||| || || || || | |||| |||||||| || ||| ||| || Sbjct 340754 TCAAACCGAAACTGGTACCCCATTCATGCTATACAAGGATGCTTGTAACAAGAAGAGTAA 340695 Query 19852 TCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTC 19911 ||| |||||| | || | |||||||| || ||| ||||| ||||||| | || || Sbjct 340694 TCAAAAGAACTTGGGTACTATCAAGTCTTCGAACTTGTGTTGTGAAATCGTTGAATACTC 340635 Query 19912 CAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTC 19947 || || || || || || || ||||| |||| || Sbjct 340634 TAACCCAGAAGAAACCGCTGTTTGTAACTTGGCTTC 340599 Score = 89.7 bits (98), Expect = 6e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 |||||||| || ||||| | |||||||||||||||||| | ||||| | || ||| Sbjct 339714 TAGTACATACCAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTA 339773 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 ||| | | ||| ||| ||||| | ||| ||||| || ||||| || ||| | Sbjct 339774 CCCATAGTTGGGGCACGAATGTGAATGTTCAACGATTGGGATTGATCGATATAAGCAGCA 339833 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 ||||| || ||||| ||||| | |||||||| || ||||| | ||| ||| | Sbjct 339834 CGGTCAGCGGCCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAA 339893 Query 78379 GCCTTCAGCTCTTCCTGGATGT 78400 | || ||||||| |||||| Sbjct 339894 TCTTTTAGCTCTTGTGGGATGT 339915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524553163840