Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2 165 9e-36 >seq2 Length=945054 Score = 165 bits (182), Expect = 9e-36 Identities = 463/700 (66%), Gaps = 8/700 (1%) Strand=Plus/Minus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 || || ||| || ||||| | || ||||| || ||||| |||| || || ||||| Sbjct 341380 GAAACTTACAACCTAATGTCTCTAAGATACTTCACACACGCTTCGCCTACACTTTTCAAT 341321 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 |||||||| ||| || || ||||| || ||||| ||||| |||||||| || || Sbjct 341320 GCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATGAAGGAAGATTCC 341261 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 || || || || ||||| || | ||||| |||||| ||||| ||| | |||||| Sbjct 341260 ATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAGACCGCTGGTGGT 341201 Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 || ||| | ||| | | | ||| | ||| | | ||| | || || || ||||| Sbjct 341200 ATTGGTTTGCACATTCAC-AACATTCGTTCTACCGGTTCTTACATTGCTGGTACTAACGG 341142 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | | || || | || ||| | || || ||||||||||| ||||| ||||| | Sbjct 341141 TACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCCCGTTACGTTGA 341082 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 ||| |||||| ||| | || | |||||| | ||| ||||||| |||||| | || Sbjct 341081 CCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCATGGCACTCAGA 341022 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660 || | || || |||| | | ||| || ||| | ||||| || || ||| | | Sbjct 341021 TATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATCCG-TGCAAGAG 340963 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 || |||| |||| || ||||| || || || |||||| | | || |||||| |||| | Sbjct 340962 ACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGAGTCGAGAAGAACGAAG 340903 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780 | ||| || | | || ||||| || ||| | | | ||| |||||||| || | Sbjct 340902 ATTGGACTTTGTTCTCTCCAAACGAAGCACCAGGCTTACCAGATGTTTACGGTGATGAAT 340843 Query 53781 TTAACGAGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 || | | |||| || ||| |||| | ||||| | |||| |||||||| Sbjct 340842 TTGAAGCATTGTA-CGAACGTTACGAGAGAGAAGGCCGTGGTAGAAAGACTGTCAAGGCT 340784 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGC-CAGGTGGAGACGGGAACGCCGTACATGTG 53898 | || | ||| | || ||| | | ||| || || || || || || | |||| Sbjct 340783 CAAAAGTTGTGGTACGCTATCTTGGA-AGCTCAAACCGAAACTGGTACCCCATTCATGCT 340725 Query 53899 CTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 ||||||||| | ||| ||||||| || || |||||| Sbjct 340724 ATACAAGGATGCTTGTAACAAGAAGAGTAATCAAAAGAAC 340685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215753752800