Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq33 143 6e-29 seq32 129 1e-24 seq19 129 1e-24 >seq33 Length=1695378 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | |||||| || || || ||||||||||| || || | || || ||||| Sbjct 913927 TCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCC 913868 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| | ||||| || || || || | | ||||||||| ||||||| |||||||| Sbjct 913867 GTCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 913808 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || |||||||| ||||| || || || |||||||| |||||| || | |||||| Sbjct 913807 ATCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 913748 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || | ||||| ||||| | |||||||| Sbjct 913747 GGTCTTACCTGTTAACGTCTTGACAAAGATTTGCATTTT 913709 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| | ||| || ||||| || ||||||||||| || || | || || ||||| ||||| Sbjct 914833 GACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTC 914774 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 | ||||| || || || || | | ||||||||| ||||||| ||||||||||| || Sbjct 914773 TAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG 914714 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 ||||| ||||| || || || |||||||| ||| || || | |||||| ||||| Sbjct 914713 AATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTT 914654 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || | |||||| || || | ||||| Sbjct 914653 ACCTGTCAAAGTCTTGACGAAGATTTGCAT 914624 Score = 123 bits (136), Expect = 6e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | |||||| || || || ||||| ||||| || || | || || ||||| Sbjct 914155 TCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCC 914096 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| | || || || || || || | | ||||||||| ||||||| |||||||| Sbjct 914095 GTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 914036 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || ||||| ||||| || || || |||||||| |||||| || | |||||| Sbjct 914035 GTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 913976 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | |||||| || || | ||||| Sbjct 913975 GGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 913940 >seq32 Length=1561830 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | ||| | |||||| ||||| || ||||||||||| || || | | || || Sbjct 1515008 AGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTA 1515067 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||||| ||||| || || ||||| | | ||||||||| || |||| |||||| Sbjct 1515068 CCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 1515127 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || ||||| || || || || ||||||||||| ||| || || | |||| Sbjct 1515128 TTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTG 1515187 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| || || | ||||| || || Sbjct 1515188 ATGGTCTTACCAGTCAAGGTCTTGACGAA 1515216 >seq19 Length=169523 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | |||||| || || || ||||||||||| || || | | || || || Sbjct 25839 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 25780 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || ||||| | | ||||||||| ||||||| |||||||| Sbjct 25779 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 25720 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || || || || |||||||| || ||| || || | || || Sbjct 25719 GTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 25660 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || ||||| || || | ||||| Sbjct 25659 AGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 25624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151465341140