Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq33 143 6e-29
seq32 129 1e-24
seq19 129 1e-24
>seq33
Length=1695378
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | |||||| || || || ||||||||||| || || | || || |||||
Sbjct 913927 TCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCC 913868
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||| | ||||| || || || || | | ||||||||| ||||||| ||||||||
Sbjct 913867 GTCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 913808
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|| |||||||| ||||| || || || |||||||| |||||| || | ||||||
Sbjct 913807 ATCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 913748
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | ||||| ||||| | ||||||||
Sbjct 913747 GGTCTTACCTGTTAACGTCTTGACAAAGATTTGCATTTT 913709
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||| | ||| || ||||| || ||||||||||| || || | || || ||||| |||||
Sbjct 914833 GACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTC 914774
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
| ||||| || || || || | | ||||||||| ||||||| ||||||||||| ||
Sbjct 914773 TAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG 914714
Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084
||||| ||||| || || || |||||||| ||| || || | |||||| |||||
Sbjct 914713 AATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTT 914654
Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || | |||||| || || | |||||
Sbjct 914653 ACCTGTCAAAGTCTTGACGAAGATTTGCAT 914624
Score = 123 bits (136), Expect = 6e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | |||||| || || || ||||| ||||| || || | || || |||||
Sbjct 914155 TCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCC 914096
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||| | || || || || || || | | ||||||||| ||||||| ||||||||
Sbjct 914095 GTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 914036
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || ||||| ||||| || || || |||||||| |||||| || | ||||||
Sbjct 914035 GTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 913976
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || | |||||| || || | |||||
Sbjct 913975 GGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 913940
>seq32
Length=1561830
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||| | ||| | |||||| ||||| || ||||||||||| || || | | || ||
Sbjct 1515008 AGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTA 1515067
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| ||||||| ||||| || || ||||| | | ||||||||| || |||| ||||||
Sbjct 1515068 CCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 1515127
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||| || ||||| || || || || ||||||||||| ||| || || | ||||
Sbjct 1515128 TTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTG 1515187
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| || || | ||||| || ||
Sbjct 1515188 ATGGTCTTACCAGTCAAGGTCTTGACGAA 1515216
>seq19
Length=169523
Score = 129 bits (142), Expect = 1e-24
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | |||||| || || || ||||||||||| || || | | || || ||
Sbjct 25839 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 25780
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || || ||||| | | ||||||||| ||||||| ||||||||
Sbjct 25779 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 25720
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || |||||||| || ||| || || | || ||
Sbjct 25719 GTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 25660
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || ||||| || || | |||||
Sbjct 25659 AGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 25624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151465341140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |