Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq32 221 1e-52 >seq32 Length=1561830 Score = 221 bits (244), Expect = 1e-52 Identities = 573/854 (67%), Gaps = 21/854 (2%) Strand=Plus/Minus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| |||||||| || || |||| ||||||||||||||| ||||| || | || Sbjct 411938 ACACCAGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAG 411879 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTAG 4366 ||||| ||||||||||| || || || ||||| ||||||| | ||| || || | | Sbjct 411878 GAAATGTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAA- 411820 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| || || | || ||| || |||||||| | || ||| |||| | || ||| || Sbjct 411819 AGCAACCAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCAT 411760 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTT 4485 || | || || ||||| |||| | || | ||||| ||| || || |||| Sbjct 411759 ACCCAATAGAGAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTT 411701 Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATT-TACTAAGTATCCAAACA 4542 ||||||| || ||||| |||||| ||| || || || | | || || || | Sbjct 411700 CTGTGATGAT-TCTTTCGACA-ATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAAT-A 411644 Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602 ||||| ||||| || ||||||||||| ||||||| ||||| |||||| || || | Sbjct 411643 GCAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGG 411584 Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662 | || || ||||| ||||| |||| || | ||| || || || ||||| || ||||| | Sbjct 411583 TCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGA 411524 Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT 4722 | || | ||||| ||||| || ||||| || |||| || | || ||||| || Sbjct 411523 AAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA-TAG--GGCTTCGT 411467 Query 4723 CTT---TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATA 4779 | | ||||||| | | ||||| | ||| |||| || | ||||| || | | Sbjct 411466 CATCACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAA 411407 Query 4780 TAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839 | || || || || | ||| || || | || |||||||| || | | Sbjct 411406 TGGCATTCAACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACG 411347 Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899 ||| |||| || || || ||||| || ||| || || ||||| || || | |||| Sbjct 411346 AATAAGTTTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTT 411287 Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959 ||| | ||| || || | | || |||| || ||||||||||| || ||||| || Sbjct 411286 CTGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGG 411227 Query 4960 TGGCTGCAAAAAACGCCA--AAACATGAGAT-ATAAAGTACT-GTTCGTCAGGCTTAAGT 5015 || ||||| ||||| | | | ||||| | ||| || |||| || | | Sbjct 411226 AAGCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCTG 411168 Query 5016 TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCT 5075 || ||||||| | | ||| || | ||||| | ||||||| |||||||||| || || Sbjct 411167 TTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCC 411108 Query 5076 TCCGCTTTTTTGTA 5089 || ||| | || || Sbjct 411107 TCGGCTCTCTTATA 411094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049412631988