Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2 313 3e-80 seq32 217 2e-51 seq27 150 2e-31 >seq2 Length=945054 Score = 313 bits (346), Expect = 3e-80 Identities = 1367/2143 (64%), Gaps = 46/2143 (2%) Strand=Plus/Plus Query 76778 CAAT-GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTT 76836 |||| || ||||| || | | |||||| | || || | ||| |||||||||||||| | Sbjct 339670 CAATAGTGAACTGGATAGCGGCAGATGCAGCTTGAGTTCTTAGGTAGTACATACCAGTCT 339729 Query 76837 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGG 76896 | | |||| |||||||||||||||||||| |||| || | | || | Sbjct 339730 TCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTGGGGCAC 339789 Query 76897 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 76956 || ||||| |||| ||| || ||||||||| |||| | | ||||| ||||| | Sbjct 339790 GAATGTGAATGTTCAACGATTGGGATTGATCGATATAAGCAGCACGGTCAGCGGCCATAT 339849 Query 76957 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 77016 |||||| |||||| | |||||||||| ||| ||| | | | ||| | || | || Sbjct 339850 CGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAATCTTTTAGCTCTTGTG 339909 Query 77017 GAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCAT 77073 | | ||||| ||||| || |||||| ||| | || || ||| ||| | | Sbjct 339910 GGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTTCATAGCTT 339969 Query 77074 CATTCCACAATTTCCTC-TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAAT 77132 ||| ||| ||| || || ||| | | || | | ||| || || ||||| ||| Sbjct 339970 CATCCCA-AATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGATTTGGAAT 340028 Query 77133 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 77192 || ||||| || || | ||||| ||| || || || ||||| || | | | || ||| Sbjct 340029 TCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACACTCGTTG 340088 Query 77193 TTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTG 77252 | ||||| ||||| | |||||||| |||||||| || || | ||| ||| ||||| Sbjct 340089 TAACCCAAGATTTGGGATGTAGAAGCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTT 340148 Query 77253 AGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACA 77312 ||||| ||| |||||| | | || | | | ||| ||||| || | | || Sbjct 340149 AGACCGTGTTGCTTGATTTCAGCCTTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTC 340208 Query 77313 ACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCA 77372 | |||| |||||| |||||| | || | | || || || | | |||| Sbjct 340209 TTACCCCATAGATCGAATTGTAACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCA 340268 Query 77373 TAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTT 77432 || || |||||| | || | ||| ||||| | || || | || || ||| Sbjct 340269 TATGGACCTTCTTCCTTTGCCAATTCCATGGAGGCTTCACAAGCACCATGGTAGATAGTT 340328 Query 77433 TCGAAAATCTTCTTATTGAGATCT-TGTGCTTCAATACTATCAAACGGATAATGTAAAAG 77491 || || || | || | |||| | |||||| | ||||| || || ||| | Sbjct 340329 TCAAAGATTTGGACGTTCA-ATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACGTAGCAT 340387 Query 77492 AATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 77551 || || || || ||||| || ||||| || | ||||||||||||||||| | || || Sbjct 340388 CATGAAAGCGTCGGCTAAACCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGA 340447 Query 77552 AATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAAC 77611 || |||| | || |||||||| ||| ||| || ||| | || | || | | Sbjct 340448 TCTTCTAGCAGTTTCAACTGGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGT 340507 Query 77612 AACTACTTTAA----------CCACGTCCTTTAGTTTAAGAAAATCAAATCTT-CCATC- 77659 | || ||| | || || | |||| || | | |||| ||||| Sbjct 340508 CAAAACCTTAGAGATATCGTGCAACTTCTTGAAGTTGTAGGT--TTGAGTCTTACCATCG 340565 Query 77660 -----TATAACAAACAT-GTT--CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCA 77711 ||| ||| | | | |||||| ||||| || | |||||||| || || Sbjct 340566 TTTGATATTTCAATGAACGCTGGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCT 340625 Query 77712 TTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGA 77771 | | ||| | |||| | || || ||| | || | | |||||||| |||| Sbjct 340626 TCTGGGTTAGAGTATTCAACGATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAG 340685 Query 77772 TTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTT 77831 || | ||| || ||||| || || || | ||||| || || || || || || || ||| Sbjct 340686 TTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTT 340745 Query 77832 TCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGT 77889 || | || | ||| | |||| | ||| | ||| | ||| || | | ||| | Sbjct 340746 TCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGCCTTGACAGTC--TTTCT 340801 Query 77890 ATC---GCCTCTCTCTTTCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAAC 77944 | | |||| ||||| || || | ||| | || |||||||||||| || |||| Sbjct 340802 ACCACGGCCT-TCTCTCTCGTAACGTTCGTACAATGC--TTCAAATTCATCACCGTAAAC 340858 Query 77945 ATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAAC 78004 ||| || || || ||| ||||| | | ||| | ||| || | | | || || Sbjct 340859 ATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGAC 340918 Query 78005 TCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTC 78064 || ||||| || ||||| || |||||||| || || | |||| | | ||| Sbjct 340919 TCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTC 340978 Query 78065 TTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTC 78124 ||| || || |||||| | | |||| || || | ||||| || |||||||| || Sbjct 340979 TTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTC 341038 Query 78125 TAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGT 78184 | || | || | | ||||||| || ||||| || || || | || | ||| || Sbjct 341039 GATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGGGCAGT 341098 Query 78185 GTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAAT 78244 ||| || |||| | | ||||||||||||||||||||| || || || || |||| ||| Sbjct 341099 GTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAAT 341158 Query 78245 ATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGA 78304 ||| || | | ||||| || |||| | || || || || || ||||||| Sbjct 341159 GTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGA 341218 Query 78305 TATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTT 78364 || | || || ||||| || ||||| ||||| || || || ||| ||||| Sbjct 341219 GATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGC 341278 Query 78365 AAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGA 78424 | || ||||| |||||||| ||||| ||| || ||||| || | ||| || || Sbjct 341279 CACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGA 341338 Query 78425 TGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC 78484 || || || || || || ||| | ||| ||||| ||||| | | | ||| || || Sbjct 341339 AGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATC 341398 Query 78485 CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTT 78544 | || || || || || || | ||| | ||| || ||||| | |||| | ||| Sbjct 341399 TCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAGCAACCTT 341458 Query 78545 ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 78604 | || ||| | | |||||| || |||||| || || ||||| || |||||| || Sbjct 341459 ACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGTTGAATTG 341518 Query 78605 AAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATC 78664 || ||||| ||||| | ||| |||| || | ||||||||| | | || || || Sbjct 341519 GAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCTCCATGACGATGTC 341578 Query 78665 CATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAA 78724 || | ||||| ||||| || | | |||| | || || || || | | | Sbjct 341579 ATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTTTGGGTTGACCCATCTGTA 341638 Query 78725 TAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGC 78784 || ||||| | || | ||| | || | |||| |||||| | ||||| | || Sbjct 341639 CAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTGCAAGTTAGAAATGGC 341698 Query 78785 TATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT-GGCTGCTATTT 78843 ||||| || || | | |||| ||||| || || || || || || ||| | ||| Sbjct 341699 AATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CATGTAGGCACATGTTT 341757 Query 78844 CTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATA 78886 | || || || ||||||| || | ||| || || || | ||| Sbjct 341758 CAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 341800 >seq32 Length=1561830 Score = 217 bits (240), Expect = 2e-51 Identities = 588/890 (66%), Gaps = 30/890 (3%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || || ||| | || ||||| ||||| ||||| || |||| || || ||| Sbjct 411929 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 411870 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 |||||||| || ||||| ||| | || || ||| || ||||| | | Sbjct 411869 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 411810 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029 ||||| |||||||| ||||| | ||| ||||||| ||| ||||| || | || Sbjct 411809 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 411750 Query 48030 TTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 ||| |||||||| || | ||| | ||||| |||||| ||||| || | | Sbjct 411749 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTC------TGT 411697 Query 48089 CGATGTTACCGTTTCCTCACTTGGTGGATA---------CAACAAATGTTTAAACATTAA 48139 |||| | | |||| || | ||||| | |||||| | || | || Sbjct 411696 -GATGATTC--TTTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAA 411640 Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199 ||| ||||| || || | |||||||||||| | ||| |||||||| || || || | Sbjct 411639 ACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAA 411580 Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259 ||| ||||| | || || || | ||| || || || || || || ||||| || || Sbjct 411579 ACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAA 411520 Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---G 48316 | ||||| ||||| || || || | ||| || |||| |||||||| | | Sbjct 411519 CACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACG 411460 Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCAT 48375 ||||| | ||||| | |||||| |||||| | || || ||||| || |||| Sbjct 411459 AATCCATCTAATGGCCCATTGAGCCTT-TTCTTTGATTTGTGGAATGGTTTCAATGGCAT 411401 Query 48376 TAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACA 48435 | || | |||| | ||| || ||| || | |||||| || || || | ||| Sbjct 411400 TCAACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAG 411341 Query 48436 TTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGA 48495 ||||||||||||| ||||| || || || || ||||| ||||| | ||||||| | Sbjct 411340 TTTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAA 411281 Query 48496 TCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAG 48555 | || ||||| | | | || ||| |||| || || || || || ||||| ||||| Sbjct 411280 TTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAG 411221 Query 48556 CAAAAAATGCTAATACATGTTTA-ATAAAATATTTTTCGTTGGAAGTCAGT---TTATTC 48611 |||| || || | || | | | || ||| || | ||||| ||| | || ||| Sbjct 411220 CAAAGAACGCAAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTC 411162 Query 48612 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCT 48671 ||||||| | ||| || || | ||| | ||||||||| |||||||| || ||||| ||| Sbjct 411161 CAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCT 411102 Query 48672 TTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 | ||||| | ||| || || ||| | ||||||||||| ||||| Sbjct 411101 CTCTTATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 411052 >seq27 Length=1195410 Score = 150 bits (166), Expect = 2e-31 Identities = 406/612 (66%), Gaps = 27/612 (4%) Strand=Plus/Minus Query 78002 AACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATG 78061 ||| |||| |||||| ||||| || |||||||||||| ||||| ||||||| || Sbjct 100459 AACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCAT 100400 Query 78062 TTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121 |||||| ||||| ||||||| | || | | || || |||||||| ||||||||| Sbjct 100399 TTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGG 100340 Query 78122 TTCTAGATATATTGCCATAA--CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTG 78179 ||| | ||||| || || | ||||| ||||| || || || ||||| | |||||| Sbjct 100339 TTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTT 100282 Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCA 78239 || ||||| ||| |||| | || ||| |||| | ||| || || || ||||| | || Sbjct 100281 GCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCT 100222 Query 78240 GAAATATAACTTCCACTTGCGCGAATATT--ACTAATGGATATCCCTATTCCTCCTGCCA 78297 || |||||| ||| |||| | ||||| || ||| ||| || || || || | Sbjct 100221 GAGATATAAGCACCATTTGCCCTTATATTTGACACATG--TATTCCAATACCACCAGATG 100164 Query 78298 TCTTAGATATTAGAGC-GCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCC 78356 ||| ||||| | ||| | || | || || | || ||||| || ||| ||| || Sbjct 100163 CCTTTGATATCAAAGCAGTCTTGTGT-AAAGTCTTATAAATACCATCAATAGAGTCTTCT 100105 Query 78357 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAAT 78416 ||| | |||||| || |||| | |||| || || || ||| || || Sbjct 100104 TCCATAGCCACAAGAAAGCATGATGACAAATATTGATTTACTGTACCGCTATTGAACAAA 100045 Query 78417 GTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGAT 78476 || || || || || |||| | |||| || | || | ||| || |||| ||| Sbjct 100044 GTAGGTGAAGCGTGAATAAAATACTTTTGTGACATTAATTGGTAAGTCTCAAGTACTGCA 99985 Query 78477 TCTATGTCCCATTGA--------TGAATTCCTACCGCTACACGCATCAACATATGCTGAG 78528 ||||| | |||| | ||||| | | || || | ||| |||||| ||| | Sbjct 99984 TCTATAT--CATTAAATGGTCCGTGAATAGCAAGAGCAACTCTCATGAACATAAACTGCG 99927 Query 78529 GTCTTTCAACCGT---CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA--GTTTT 78583 | ||||| || || ||| ||| | |||| ||| ||||| || |||| || || Sbjct 99926 GAGTTTCATAAGTTTCCTCATTGTTTCTCTTCATCAAATATGA--CTTACAAAGTGTCTT 99869 Query 78584 AAAACCAAAATA 78595 |||||||||| Sbjct 99868 CCAACCAAAATA 99857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668487399040