Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2 239 6e-58 seq32 197 2e-45 seq27 159 5e-34 >seq2 Length=945054 Score = 239 bits (264), Expect = 6e-58 Identities = 583/878 (66%), Gaps = 14/878 (2%) Strand=Plus/Plus Query 76350 ACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAA 76409 |||||||||| || | || | ||| || ||||| |||||||| | ||||| || || | Sbjct 340669 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 340728 Query 76410 CAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGC 76467 || || || |||||||| | || | ||| | |||| | ||| | ||| | ||| Sbjct 340729 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGC 340786 Query 76468 TTTTATTATAGATTTGTATCGCTTC--TCTCTTTCATATTGTGTATATAACCGTTCAAAT 76525 || | | ||| || | | | ||||| || || || || || ||||||| Sbjct 340787 CTTGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAAT 340844 Query 76526 TCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCA 76585 ||||| || ||||||| || || || ||| || ||| | | ||| | ||| || Sbjct 340845 TCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCT 340904 Query 76586 CCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 76645 | | | || || | ||||| || ||||| || |||||||| || || | ||| Sbjct 340905 TCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCT 340964 Query 76646 CGGGTTCTACG---TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATA 76702 | || ||| |||||| || || |||||| | | || | ||| || | ||| Sbjct 340965 C---TTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATA 341021 Query 76703 TCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGA 76762 || || |||||||| || | || | || | |||| |||| || ||||| || || Sbjct 341022 TCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGG 341081 Query 76763 TCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA 76822 || | || | ||||||||| || |||| | | |||||||||||| |||||||| ||| Sbjct 341082 TCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTA 341141 Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882 || || || |||| ||| ||| || | |||||| || ||| | || || Sbjct 341142 CCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATA 341201 Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942 || || || | |||||||| | ||||| ||||| ||||| || || || || || Sbjct 341202 CCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATG 341261 Query 76943 CTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 77002 ||| ||| ||||| | || ||||| |||||||| ||||| ||| || ||| Sbjct 341262 GAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCA 341321 Query 77003 TTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 77062 || || | |||||| || || || ||||| || || ||| | ||| ||||| ||||| Sbjct 341322 TTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCC 341381 Query 77063 ATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGA 77122 | ||| ||| ||||| | || || || ||||| || | ||| | ||| || ||| Sbjct 341382 AAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGA 341441 Query 77123 GGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAA 77182 || ||||| || |||| || ||| | | |||||| || |||||| || || ||| Sbjct 341442 GGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAA 341501 Query 77183 CCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 || || |||||| || || ||||| ||||| | ||| Sbjct 341502 CCGAAGTAGTTGAATTGGAAATCTCTGTCGTAGACAAT 341539 >seq32 Length=1561830 Score = 197 bits (218), Expect = 2e-45 Identities = 578/881 (66%), Gaps = 12/881 (1%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| || || | || ||||| ||||| ||||| || |||| || || ||| Sbjct 411929 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 411870 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 |||||||| || || || ||||| || || || ||| || ||||| | | Sbjct 411869 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 411810 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 ||||| |||||||| ||||| | || ||||||| ||| ||||| || | || Sbjct 411809 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 411750 Query 46519 TTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577 || |||||||| || | ||| | ||||| ||| || ||||| || | || || Sbjct 411749 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 411691 Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637 | || | | | ||| | | ||||||| | || | ||||| ||||| Sbjct 411690 TCTTTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAA 411631 Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697 || || | ||||||||||| | ||| |||||||| || || || | || ||||| Sbjct 411630 GTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCAT 411571 Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757 | || ||| || | ||| || || || || || || ||||| || || | ||||| Sbjct 411570 CAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTTC 411511 Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACCT 46814 || || ||||| || || | ||| || |||| ||| || | || ||||||| || Sbjct 411510 CACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATCT 411451 Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 ||||| | |||||||| || | || || ||||| || ||||| || | || Sbjct 411450 AATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAA 411391 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934 || | ||| | | ||| || | || || || || || | ||| |||| || || Sbjct 411390 GTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTG 411331 Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994 ||||||||| || || || || ||||| ||||| | ||||| | ||| || ||||| Sbjct 411330 AATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTC 411271 Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054 | | | || ||| ||| || || ||||| || ||||| ||||||||| || || Sbjct 411270 AGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGC 411211 Query 47055 CAATACATGTTTA-ATAAAATATTTTTC---ATCGGT-AGTCAGTTTATTCCAGTCATTG 47109 | || | | | || ||| || | || ||| | | || | || |||||||||| Sbjct 411210 AAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTG-TTGTTCCAGTCATGA 411153 Query 47110 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATAC 47169 | ||| || || | ||| | ||||||||| ||||| || || ||||| ||| | ||||| Sbjct 411152 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 411093 Query 47170 ATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 | ||| || || | || | ||| || |||| ||||| Sbjct 411092 GCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 411052 >seq27 Length=1195410 Score = 159 bits (176), Expect = 5e-34 Identities = 406/612 (66%), Gaps = 27/612 (4%) Strand=Plus/Minus Query 76597 AACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACG 76656 ||| |||| |||||| ||||| || |||||||||||| ||||| ||||||| || Sbjct 100459 AACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCAT 100400 Query 76657 TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGG 76716 |||||| ||||| ||||||| | || | || ||| || |||||||| ||||||||| Sbjct 100399 TTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGG 100340 Query 76717 TTCTAGATATATCGCCATAA--CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTG 76774 ||| | ||||| || || |||| || ||||| || || || ||||| | |||||| Sbjct 100339 TTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTT 100282 Query 76775 GCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCA 76834 || ||||| ||| |||| | || ||| |||| | || || || |||||||| | || Sbjct 100281 GCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCT 100222 Query 76835 GAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCC---TGCC 76891 || |||||| ||| ||| | ||||| | | || || || || || |||| Sbjct 100221 GAGATATAAGCACCATTTGCCCTTATATTTGACACATGTATTCCAATACCACCAGATGCC 100162 Query 76892 ATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCC 76951 || || || | |||| | || || | ||| || || || ||| || || Sbjct 100161 ---TTTGATATCAAAGCAGTCTTGTGTAAAGTCTTATAAATACCATCAATAGAGTCTTCT 100105 Query 76952 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAAT 77011 ||| | |||||| || |||| | |||| || || || ||| ||||| Sbjct 100104 TCCATAGCCACAAGAAAGCATGATGACAAATATTGATTTACTGTACCGCTATTGAACAAA 100045 Query 77012 GTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCT 77071 ||||| || || ||| | || | |||| || | || | ||| || |||| ||||| Sbjct 100044 GTAGGTGAAGCGTGAATAAAATACTTTTGTGACATTAATTGGTAAGTCTCAAGTACTGCA 99985 Query 77072 TCTATATCCCATTGA--------TGAATTCCTACAGCGACACGCATCAACATATGCTGAG 77123 ||||||| |||| | ||||| | | ||| || | ||| |||||| ||| | Sbjct 99984 TCTATAT--CATTAAATGGTCCGTGAATAGCAAGAGCAACTCTCATGAACATAAACTGCG 99927 Query 77124 GTCGTTCTACAGT---CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA--GTTTT 77178 | ||| ||| || ||| ||| | |||| ||| ||||| || |||| || || Sbjct 99926 GAGTTTCATAAGTTTCCTCATTGTTTCTCTTCATCAAATATGA--CTTACAAAGTGTCTT 99869 Query 77179 AAAACCAAAATA 77190 |||||||||| Sbjct 99868 CCAACCAAAATA 99857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934079179520