Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq33 167 5e-36 seq32 150 4e-31 seq19 149 1e-30 seq2 91.5 3e-13 >seq33 Length=1695378 Score = 167 bits (184), Expect = 5e-36 Identities = 152/192 (79%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | || || | || || |||| ||| || || ||||| Sbjct 914815 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAA 914756 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||||||||| |||||||| ||||||||||| ||||| | || || | Sbjct 914755 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCACATT 914696 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||||||||| | |||||| |||||||| ||||||||||| || Sbjct 914695 GTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGAC 914636 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 914635 GAAGATTTGCAT 914624 Score = 161 bits (178), Expect = 2e-34 Identities = 151/192 (79%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||||||||| | || || | || || |||| |||||| || ||||| Sbjct 914587 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 914528 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||||||||| |||||||| || || ||||| ||||| | || || | Sbjct 914527 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCTTGAATCTTAGACTTCACATT 914468 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||| |||||||| |||| ||||||||| | |||||| |||||||| ||||||||||| || Sbjct 914467 ATCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGAC 914408 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 914407 GAAGATTTGCAT 914396 Score = 158 bits (174), Expect = 3e-33 Identities = 150/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||||||||| | || || | || || |||| |||||| || ||||| Sbjct 914359 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 914300 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||||||||| |||||||| || || ||||| ||||| | || || | Sbjct 914299 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCTTGAATCTTAGACTTCACATT 914240 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||||||||| | |||||| |||||||| ||||||||||| || Sbjct 914239 GTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGAC 914180 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 914179 GAAGATTTGCAT 914168 Score = 154 bits (170), Expect = 3e-32 Identities = 151/195 (77%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | || || | || || |||| ||| || || ||||| Sbjct 913903 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCCGCAAA 913844 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||||||||| |||||||| ||||| ||||||||||| | || || | Sbjct 913843 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTATCTTGGATCTTAGACTTCACATT 913784 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||| ||||| | |||||| |||||||| || || ||||| || Sbjct 913783 GTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCTGTTAACGTCTTGAC 913724 Query 283088 GAATATCTGCATTTT 283102 || || |||||||| Sbjct 913723 AAAGATTTGCATTTT 913709 Score = 152 bits (168), Expect = 1e-31 Identities = 149/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||||||||| | || || | || || |||| |||||| || ||||| Sbjct 914131 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAA 914072 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||||||||| |||||||| ||||||||||| ||||| | || || | Sbjct 914071 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCACATT 914012 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||| ||||| | |||||| || || || ||||||||||| || Sbjct 914011 GTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGAC 913952 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 913951 GAAGATTTGCAT 913940 >seq32 Length=1561830 Score = 150 bits (166), Expect = 4e-31 Identities = 143/183 (78%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| | || | || || || | ||| || || ||||| Sbjct 1515034 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 1515093 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||||||||| |||||||| ||||||||||| ||||| | || || | Sbjct 1515094 GATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATT 1515153 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| |||| ||||||||| | |||||| |||||||| ||||| ||||| || Sbjct 1515154 GTCAATGGTGTCAGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGAC 1515213 Query 283088 GAA 283090 ||| Sbjct 1515214 GAA 1515216 Score = 84.2 bits (92), Expect = 5e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085 || ||||| || || | |||||||| | || || ||||||| || ||||| |||||| Sbjct 310912 GTTGGGAAACCGTCAACTTGACCGTTGGCGATAGCTCTCATCAAGGTAGACTTACCAGCA 310971 Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145 || || || || || | ||| || | | | |||||| | || | || |||||| Sbjct 310972 CCGTTTGGACCACACAAACCGTATCTTCTGGCTCTCTTCAATCTCAATTGAGTCTTGTTC 311031 Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 | | ||||| |||| || |||| |||||||||||| | ||||| ||| || || Sbjct 311032 AACAAGATCTTGGCACCGTAAGCCAAAGAGAACTCACAGTTACACAAGTCTTCACC 311087 >seq19 Length=169523 Score = 149 bits (164), Expect = 1e-30 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| | || | ||||| || | ||| || || ||||| Sbjct 25815 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 25756 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||||||||| |||||||| ||||||||||||||||| | || || | Sbjct 25755 GATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACATT 25696 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| |||| ||||||||| | || || |||||||| || | ||||| || Sbjct 25695 GTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGAC 25636 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 25635 GAAAATTTGCAT 25624 >seq2 Length=945054 Score = 91.5 bits (100), Expect = 3e-13 Identities = 181/263 (69%), Gaps = 9/263 (3%) Strand=Plus/Plus Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAA 301485 ||||| ||||| || || ||| ||||| | || || ||| || ||||||| ||| Sbjct 154769 AAAATCGACCCATACATGAACCTCGATGCAGGTACAATGTCTCCTTTGGAACATGGTGAA 154828 Query 301486 GTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545 || ||| | | ||||||| ||| |||||| ||||| |||| |||| ||||||| Sbjct 154829 TGTTTTGTGTTGAACGATGGTGGTGAGACCGATTTGGATTTGGGTAACTATGAACGTT-- 154886 Query 301546 ACTTCA---TTAACCCTTAAGC-GTGAAAGTAATTTTACGACTGGCCAAGTTTATTTAAA 301601 |||| | ||| | |||| | | || ||| | || ||||| | ||||| | | Sbjct 154887 ACTTGAACGTTA--CTTTAACCAGAGACCATAACATCACTACTGGTAAGGTTTACTCTCA 154944 Query 301602 AGTTATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCA 301661 ||||| | || ||||| | ||| ||| | || ||||| |||||||||||||| || Sbjct 154945 TGTTATTGCCAAGGAACGTAAGGGTGATTATTTGGGTAAGACCGTGCAAGTTGTTCCTCA 155004 Query 301662 CATCACCGATGAAATCAAAAGAA 301684 | ||| | ||||| | ||||| Sbjct 155005 TTTGACCAACGAAAT-ACAAGAA 155026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738717191544