Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq32 159 4e-34 >seq32 Length=1561830 Score = 159 bits (176), Expect = 4e-34 Identities = 538/823 (65%), Gaps = 21/823 (3%) Strand=Plus/Minus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299 ||||||| ||||| || ||||| | || || || ||||||||||| || ||||| |||| Sbjct 411907 TTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAATGGGTTAG 411848 Query 23300 AAGTATTATA-TACAGCTT--TACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATT 23356 || || || ||| ||| | | || || | || ||||| ||||||| Sbjct 411847 TGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTA---GTCTGTCTGCAACAAATT 411791 Query 23357 CAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCAT 23416 | | ||||| |||||||||| ||| ||||| | ||| || || | || || Sbjct 411790 CGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCGTCGA 411731 Query 23417 ATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT---TGAACAATAACTTCTT 23473 ||| || ||||| || |||||| ||| | || ||| | ||||| ||| Sbjct 411730 TGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAAT--CTTTGG 411673 Query 23474 CACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTT 23533 || | | | | || |||| | || | ||||| ||||| || || | |||| Sbjct 411672 ATCTGGCTTGTTCTTC-AAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAACCTT 411614 Query 23534 CATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAA 23593 |||| || | ||||||||| || || || || || |||||||| || || || || | Sbjct 411613 CATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTCTTCA 411554 Query 23594 TCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCA 23653 ||| || || |||||||| || || || || || | ||| || || || || || || | Sbjct 411553 ACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAACGCAA 411494 Query 23654 CAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCT 23713 | | | | | | || || | | |||| ||||||| | | | ||| | ||||| Sbjct 411493 CCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATCTAATGGCCCATTGAGCCT 411434 Query 23714 TCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTT-TTCTTCATTA 23772 | ||| | ||| |||||||| || || || | | |||| | ||| | | | Sbjct 411433 TTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACA-AGAAGTCGTGTTCCTTAGGA 411375 Query 23773 TCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCA 23832 || | || || || ||||| | || ||| |||| || ||||| ||||| || | Sbjct 411374 TCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGAATGTTTTCCATCATA 411315 Query 23833 ATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTA 23892 || || || || || ||||| | ||||| | | ||| || ||| | | || ||| Sbjct 411314 ATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAGAAGTTTTCC 411255 Query 23893 GCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT- 23951 | || |||||||| || |||||||| |||||||||||| ||||| || || Sbjct 411254 ACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTGGAGATG 411195 Query 23952 -AAAATGTCT--TTCATCAGTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAAT 24007 ||||| ||| ||| || ||| || | || ||||| |||| || ||| || || |||| Sbjct 411194 AAAAATCTCTCGTTC-TC-GTTCATTCTGTTGTTCCAGTCATGAAGATCCTTGGACAAAT 411137 Query 24008 CAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATA 24050 | | ||| ||| | ||||||||| ||| ||| | |||||| Sbjct 411136 CGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATA 411094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487765330400