Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3 129 6e-25 >seq3 Length=1564943 Score = 129 bits (142), Expect = 6e-25 Identities = 286/429 (67%), Gaps = 0/429 (0%) Strand=Plus/Minus Query 16201 ACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAA 16260 ||| || |||||| || | ||||| ||||||| || | |||||| || || || || Sbjct 415921 ACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAA 415862 Query 16261 CCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAA 16320 |||||||| || ||||| |||||||| || ||||| || || || || || || Sbjct 415861 ACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAA 415802 Query 16321 TATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACG 16380 | ||| || || | || || || | |||| ||| ||||| || || | || ||| Sbjct 415801 CACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACG 415742 Query 16381 AATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTT 16440 ||||||| | |||||| || |||| ||| || || ||||| ||||| || Sbjct 415741 AATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATT 415682 Query 16441 AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACAT 16500 ||||| || | ||||| | ||| | || || || ||||||| || || | Sbjct 415681 CAACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGT 415622 Query 16501 TTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTAT 16560 ||| ||||| ||||| || || || || || || ||||| || || || | || Sbjct 415621 TTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAAT 415562 Query 16561 TTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGC 16620 ||| || || | | || |||| ||| ||| || ||||||||||| || ||||| Sbjct 415561 TTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGC 415502 Query 16621 AAAAAACGC 16629 ||| ||||| Sbjct 415501 AAAGAACGC 415493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414342465880