Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1 114 9e-21 >seq1 Length=1722779 Score = 114 bits (126), Expect = 9e-21 Identities = 395/611 (65%), Gaps = 29/611 (5%) Strand=Plus/Minus Query 101684 GCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGC 101743 ||||| | |||||| ||| | || ||||| || | ||||||||| || || |||| Sbjct 858966 GCATCGACGTGATCCTTATATACATGCGCATCACCAAGAGTATGGATGAATTCACCAGCG 858907 Query 101744 ACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAAT 101803 | | | | || |||||||| || | || | ||| ||||||||| || Sbjct 858906 TCCATGTCACACACCATTGCAATCATCTTCGTCAGTAGGGCATAAGAAGCAATGTTGAAC 858847 Query 101804 GGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAG---------C 101854 || || || |||||||||||| ||| || ||||| || || || || | Sbjct 858846 GGAACACCCAACCCCATATCACATGACCTCTGATATAGCACGCACGAGAGTCTTGGTCTC 858787 Query 101855 TTTCCATCA------------CAGACATAAAATTGACTTAATACATGACAAGGCGGCAAC 101902 || || || | |||||| || ||| || ||||| || || || | Sbjct 858786 TTCCCTTCTTCCTTGGGGAAGCTGACATAGAACTGAGAGAACACATGGCATGGTGGAAGA 858727 Query 101903 ACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG 101962 ||||||| || | || | | ||||| || |||| | ||||||||||| ||| || Sbjct 858726 GCCATTTTTGGGAAATCAGGAGGGTTCCATGCTGACATAATAATCCTTCTATC-GTAAGG 858668 Query 101963 TTTGTTTTTATAGT-ATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC 102021 ||||| || | | || ||||| | |||| || ||||| |||| ||| |||||| Sbjct 858667 ATTGTTCTTCAACTTATGAATCACATCGCTTAACTGATCAACACCTTGTCCCGAATAATC 858608 Query 102022 G-CGCCCAACACCT-TTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGT 102079 || | ||| | || ||||||||||||||||| ||||| || || ||||| || ||| Sbjct 858607 ATCGTC--ACATGTCTTGTATTCTGCTCCGAAATGTCTCCATTGGAACCCATAAACTGGT 858550 Query 102080 CCAAGATCTCCTTCATCTCTGTC-ATAAAAACCAAGTTTATCTAAAAATGATCTAGATCC 102138 || | ||| || ||| ||| || ||| ||||| || || | | ||||| Sbjct 858549 CCCAAATCACCCTCACGTCTATCTGTAAGTCCCAAG-GAGTCCAAGTACTCACGGGATCC 858491 Query 102139 ATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCT 102198 ||| | ||||| || | ||| || | || || | || | |||||| | || Sbjct 858490 GTTCCCTTCCCAGATCTTCACACCTTGATCAGAGAGTTTCTTACCATCAGTACAGCCAGA 858431 Query 102199 GATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAG 102258 |||||||| || || || || || ||| | || ||| |||| ||||||| ||| Sbjct 858430 AATAAACCATAAAAGCTCAAGAATAATACCCTTGGTGAAAACTTTCTTGGTAGTTAGAAG 858371 Query 102259 TGGAAATTCAT 102269 |||||||| || Sbjct 858370 TGGAAATTTAT 858360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251160375259