Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq7 242 4e-59
seq3 170 2e-37
seq5 152 6e-32
>seq7
Length=940253
Score = 242 bits (268), Expect = 4e-59
Identities = 584/882 (66%), Gaps = 4/882 (0%)
Strand=Plus/Plus
Query 53781 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 53840
||||||| || || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 341297 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 341356
Query 53841 TGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCT 53900
||||||| ||||||||||| | || | ||| | || || | ||| | ||||||
Sbjct 341357 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 341416
Query 53901 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTC 53958
| | | ||| || | | |||||| ||||| || |||||| |||||| ||
Sbjct 341417 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 341474
Query 53959 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 54018
|| || |||||| || || || ||| | ||| | | ||| | ||| ||| |
Sbjct 341475 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 341534
Query 54019 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 54078
|| | || |||| ||||| || ||||| || ||||| || ||| || | |||||
Sbjct 341535 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 341594
Query 54079 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 54138
| | ||| || || || |||||| | | |||| ||| | | ||||| ||
Sbjct 341595 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 341654
Query 54139 ATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 54198
||||| || || | ||| | || | | ||||| | ||||| || || || || |
Sbjct 341655 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 341714
Query 54199 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATT 54258
||| | ||| ||||| || |||| | | ||||||||||||||| || || | ||| ||
Sbjct 341715 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 341774
Query 54259 GGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCC 54318
|| || | || || || | | |||||| || ||| | ||| || || ||
Sbjct 341775 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 341834
Query 54319 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 54378
|| | |||||||| | || ||| || || || || || || || || || |||
Sbjct 341835 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 341894
Query 54379 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 54438
||| ||||| | ||| ||||| |||||||| || || ||| || ||||| ||
Sbjct 341895 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 341954
Query 54439 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGC 54498
| || || |||||||| || || || || ||| | ||| ||||| || || | | |
Sbjct 341955 AAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 342014
Query 54499 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 54558
|| ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 342015 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 342074
Query 54559 TTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 54618
|||| | | ||| ||| ||| | |||||||| || |||||| || || ||||| ||
Sbjct 342075 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 342134
Query 54619 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660
|||||| || || |||| ||||| | ||| | |||||
Sbjct 342135 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTT 342176
>seq3
Length=1564943
Score = 170 bits (188), Expect = 2e-37
Identities = 578/886 (65%), Gaps = 22/886 (2%)
Strand=Plus/Minus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| || ||| | |||||||| ||||| |||||||| | || || || |||
Sbjct 416211 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 416152
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCTTTTAAATCCCAATTCAGAAA 23961
||||| || ||| |||| || || || || ||| ||||| | | || || || |
Sbjct 416151 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTA--CCTAAAGCAACCA 416094
Query 23962 TCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAA 24021
| ||| ||||| ||||| || | ||| ||||||| ||| ||||| || | |
Sbjct 416093 GTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATA 416034
Query 24022 GTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 24080
| ||| || ||||| | | ||| | |||| ||| || || || ||||| ||
Sbjct 416033 GAGAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATG 415975
Query 24081 ATAGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACA 24136
|| |||| || | | | | || | | | | | ||||| | || | ||||||
Sbjct 415974 AT---TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACA 415919
Query 24137 TGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCC 24196
|| || ||| ||| | ||| || ||||| | ||| |||||||| || || || | ||
Sbjct 415918 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 415859
Query 24197 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAAT 24256
||||| | || ||| || | ||| || |||| || || || ||||| || || |
Sbjct 415858 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACAC 415799
Query 24257 TCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCAT---GTAT 24313
||||| || || || || |||| | |||||| | || ||| ||||| | ||
Sbjct 415798 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAAT 415739
Query 24314 CCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAA 24372
||| || || ||||| | ||||| | ||| | || || || || || ||||| |
Sbjct 415738 CCATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCA 415680
Query 24373 AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTT 24432
| | ||| | ||| ||| ||| || | || || |||||||| | ||| |||
Sbjct 415679 ACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTT 415620
Query 24433 CCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 24492
| || || |||||||| || ||||| || ||||||||||| | || || | ||| |
Sbjct 415619 CGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTT 415560
Query 24493 GTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 24552
| || || | | || ||| | || ||||| ||||| || || || || ||||
Sbjct 415559 GCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAA 415500
Query 24553 AAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAAT 24609
| ||||| | || || ||| || | ||| ||| || || || ||||| |
Sbjct 415499 AGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGT 415440
Query 24610 CATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 24669
||| | ||| || || | ||| | |||||| | |||||||| || ||||| || | |
Sbjct 415439 CATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCT 415380
Query 24670 TATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715
|||| | |||||| || || || | ||||| |||| |||||
Sbjct 415379 TATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 415334
>seq5
Length=1351988
Score = 152 bits (168), Expect = 6e-32
Identities = 207/287 (72%), Gaps = 4/287 (1%)
Strand=Plus/Minus
Query 53989 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 54048
|||||| |||| | | ||||| ||| | | || | || |||| |||||| |||||
Sbjct 97103 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 97044
Query 54049 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 54108
|||||||| ||||| ||||| |||| || || ||| || ||||| ||||||
Sbjct 97043 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 96984
Query 54109 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAA- 54167
| | || | | ||| | |||||||| |||||| |||||||||||||| || ||
Sbjct 96983 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATAT--ACAAAAG 96926
Query 54168 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 54226
| ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | |
Sbjct 96925 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGC 96866
Query 54227 AACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATA 54273
| ||| |||| | |||||| || | |||||| | ||| ||||||||
Sbjct 96865 AGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATA 96819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721533206320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |