Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3 125 7e-24 >seq3 Length=1564943 Score = 125 bits (138), Expect = 7e-24 Identities = 403/622 (65%), Gaps = 5/622 (1%) Strand=Plus/Plus Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTAC 116650 |||||| || || || ||| ||||||| || | |||| || || ||| || Sbjct 415319 GAGAACAAGCGTCGTTTTGTGCTTTTCCCAATCAAGTACCACGAAATCTGGGAGGCTTAT 415378 Query 116651 AAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGC 116710 || | |||||||| || || ||||| | || || | || |||||||||| Sbjct 415379 AAGAGAGCCGAGGCCTCTTTTTGGACTGCTGAAGAAATCGATTTGTCCAAGGATCTTCAT 415438 Query 116711 GACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTT 116767 |||||| | | ||||||| |||||| | ||||||| ||||| || || Sbjct 415439 GACTGGAACAACAGAATGAACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTC 415498 Query 116768 TTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTG 116827 || || || ||| || ||||| ||||| || |||| || ||| || |||||| Sbjct 415499 TTTGCTGCTTCCGATGGTATCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTG 415558 Query 116828 CAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCG 116887 || | | || || ||| |||||||| || || || ||||| ||| | ||||| Sbjct 415559 CAAATTCCAGAAGCCAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATCCACTCC 415618 Query 116888 GAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTG 116947 |||| |||||| | || ||||| ||| | | | |||| | | ||| Sbjct 415619 GAAACTTATTCGTTGTTGATTGACACTTACATCAAGGATCCTAAGGAACACGACTTCTTG 415678 Query 116948 TTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGG 117007 ||||| ||||| || || || || ||||||| ||||| | ||||| | | ||| Sbjct 415679 TTGAATGCCATTGAAACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGG 415738 Query 117008 ATCGCCGGCAGA-GAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGG 117066 || | | || || ||| | || || | |||| || ||||| ||||| || || Sbjct 415739 ATT-CGTGATGACGAAGCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGG 415797 Query 117067 CGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCC 117126 || || || || || ||||| ||||| || ||| | ||||| || | ||||| Sbjct 415798 TGTGTTTTTCTCTGGTTCCTTCGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCC 415857 Query 117127 CGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGC 117186 || |||| ||| ||||| | || | ||| || || ||| |||| ||||||||| Sbjct 415858 AGGTTTGACCTTCTCAAACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTTGC 415917 Query 117187 CTGTTTGCTGTTCAAGCATTTG 117208 ||||||||| ||| | |||||| Sbjct 415918 CTGTTTGCTATTCCATCATTTG 415939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219142037840