Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq3 125 7e-24
>seq3
Length=1564943
Score = 125 bits (138), Expect = 7e-24
Identities = 403/622 (65%), Gaps = 5/622 (1%)
Strand=Plus/Plus
Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTAC 116650
|||||| || || || ||| ||||||| || | |||| || || ||| ||
Sbjct 415319 GAGAACAAGCGTCGTTTTGTGCTTTTCCCAATCAAGTACCACGAAATCTGGGAGGCTTAT 415378
Query 116651 AAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGC 116710
|| | |||||||| || || ||||| | || || | || ||||||||||
Sbjct 415379 AAGAGAGCCGAGGCCTCTTTTTGGACTGCTGAAGAAATCGATTTGTCCAAGGATCTTCAT 415438
Query 116711 GACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTT 116767
|||||| | | ||||||| |||||| | ||||||| ||||| || ||
Sbjct 415439 GACTGGAACAACAGAATGAACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTC 415498
Query 116768 TTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTG 116827
|| || || ||| || ||||| ||||| || |||| || ||| || ||||||
Sbjct 415499 TTTGCTGCTTCCGATGGTATCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTG 415558
Query 116828 CAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCG 116887
|| | | || || ||| |||||||| || || || ||||| ||| | |||||
Sbjct 415559 CAAATTCCAGAAGCCAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATCCACTCC 415618
Query 116888 GAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTG 116947
|||| |||||| | || ||||| ||| | | | |||| | | |||
Sbjct 415619 GAAACTTATTCGTTGTTGATTGACACTTACATCAAGGATCCTAAGGAACACGACTTCTTG 415678
Query 116948 TTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGG 117007
||||| ||||| || || || || ||||||| ||||| | ||||| | | |||
Sbjct 415679 TTGAATGCCATTGAAACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGG 415738
Query 117008 ATCGCCGGCAGA-GAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGG 117066
|| | | || || ||| | || || | |||| || ||||| ||||| || ||
Sbjct 415739 ATT-CGTGATGACGAAGCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGG 415797
Query 117067 CGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCC 117126
|| || || || || ||||| ||||| || ||| | ||||| || | |||||
Sbjct 415798 TGTGTTTTTCTCTGGTTCCTTCGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCC 415857
Query 117127 CGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGC 117186
|| |||| ||| ||||| | || | ||| || || ||| |||| |||||||||
Sbjct 415858 AGGTTTGACCTTCTCAAACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTTGC 415917
Query 117187 CTGTTTGCTGTTCAAGCATTTG 117208
||||||||| ||| | ||||||
Sbjct 415918 CTGTTTGCTATTCCATCATTTG 415939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219142037840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |