Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq3 100 2e-16 >seq3 Length=1564943 Score = 100 bits (110), Expect = 2e-16 Identities = 289/436 (66%), Gaps = 13/436 (3%) Strand=Plus/Plus Query 44852 GCCGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCG 44911 || ||| ||||||| || ||||| || ||||| ||||| || || || || || Sbjct 415763 GCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTCGCT 415822 Query 44912 GCGATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTG 44971 || || || | |||| | ||||| ||||||| || |||| || ||||||||| Sbjct 415823 GCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTG 415882 Query 44972 ATTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGAGTC 45031 |||| ||||| |||||| |||||||| |||||||||| | | |||| | | | | Sbjct 415883 ATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTG--TTTGCTAT--TCCATCATTT 415938 Query 45032 GATCAA-AAGTTGGACGCGCCCACCGTC-AACGACATGTTCTCCGAAGCCGTGGCCATCG 45089 || || ||| || | | ||| || || || || | ||||| || | |||| Sbjct 415939 GAAGAACAAGCCAGATCCAAAGATTGTCGAAAGA-ATCATCACAGAAGCTGTTGAGATCG 415997 Query 45090 AGATGGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGCGAATATGA 45149 | | | || || || ||||| |||| || | |||| |||||||| || ||| Sbjct 415998 AAAAGAGATACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTGA 416057 Query 45150 TGAGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGA 45209 ||| | ||| | || ||||| || || | || || || || | ||| ||||| Sbjct 416058 TGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGT-TGCTTTAGGTA--ACAAGA 416114 Query 45210 TGTACTATACTG---AGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAA 45266 ||||| | | ||||||||||| |||||| | || ||||| |||| || |||| Sbjct 416115 AATACTACAACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAAA 416174 Query 45267 CTAAtttttttGAGAA 45282 | ||||| || || || Sbjct 416175 CCAATTTCTTCGAAAA 416190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830352414228