Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq3 181 1e-40 >seq3 Length=1564943 Score = 181 bits (200), Expect = 1e-40 Identities = 532/811 (66%), Gaps = 13/811 (2%) Strand=Plus/Minus Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018 ||||||||||| |||||||| ||||| || | || ||||| ||||||||||| || || Sbjct 416196 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 416137 Query 16019 GGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATAATCTATCCGCCACA 16078 || || | |||||||| | | || || | | || || ||| || || ||| Sbjct 416136 GGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAACA 416077 Query 16079 AATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTGCT 16138 ||||| | || || ||||| |||||| |||||| || | || ||| || | || Sbjct 416076 AATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCG 416017 Query 16139 TCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACACTA 16198 || | || | | ||||| || | ||| ||||| |||| || |||| | ||| | Sbjct 416016 TCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT---TCTTTCGACAATC 415960 Query 16199 TTT--AAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAATCACAATGCAAT 16255 ||| | | || ||| || || | || | | ||| ||||| || ||||| Sbjct 415959 TTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAA 415900 Query 16256 CCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTT 16315 ||||| || || | || || |||||||| || || | ||||||||| | || || Sbjct 415899 CCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTC 415840 Query 16316 TTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAAT 16375 || | ||| || || || || || |||||||| || || | |||||| || || || || Sbjct 415839 TTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAAC 415780 Query 16376 GCAACCAATCGCTCACCGTA-CGTTCTAtttttactttctatccattttttagcccaatt 16434 |||||||||| ||| |||| | || | | | |||||| | | ||||| | Sbjct 415779 GCAACCAATCTTTCAGCGTATAGGGCT-TCGTCATCACGAATCCATCTAATGGCCCATTG 415721 Query 16435 tgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCTTT 16494 || |||| ||| | ||| | || || ||||| || || | | | ||| || Sbjct 415720 AGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAAGTCGTGTTCCTT 415661 Query 16495 GCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCAT 16554 ||| || ||||| || || | || ||| |||| || || || || ||||| Sbjct 415660 AGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTTTCCAT 415601 Query 16555 TGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCT 16614 || || ||||| || || || | ||||| | ||||| || |||| | || | Sbjct 415600 CATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAGAAGTT 415541 Query 16615 TTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTA-TGTGTT 16673 ||| | ||||||||||| || || |||||| ||| ||||| |||||||| | | || Sbjct 415540 TTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTG-G 415482 Query 16674 TAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCAGTCAGAAAAATCTTTTGATA 16730 || ||| | | ||||| || | | || ||||||| || ||| || || | Sbjct 415481 AGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGAAGATCCTTGGACA 415422 Query 16731 AATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761 |||||| ||||| ||||||||||||| || Sbjct 415421 AATCGATTTCTTCAGCAGTCCAAAAAGAGGC 415391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511947967400