Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 1e-19
seq3 102 6e-17
seq5 93.3 3e-14
>seq2
Length=1688883
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
||||||||| ||||| ||||||||||||||||| | | ||| | | ||||| |||||
Sbjct 907959 GTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCAGATAGAGTTCTTCCGTCTTCTAATTG 907900
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
||| |||||| | || | ||||||||| || || | ||||||||||| || |
Sbjct 907899 TTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTATCTTGGATCTT 907840
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
||| || | ||| ||||||| | || ||| | |||||| | || || ||
Sbjct 907839 AGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCTGT 907780
Query 18302 CAATGTTTTTACAAAAATTTGCATTTTTAAACTCTT 18337
|| || || ||||| |||||||||||||| ||||
Sbjct 907779 TAACGTCTTGACAAAGATTTGCATTTTTAATGTCTT 907744
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
||||||||| ||||| ||||||||||||||||| | | ||| | | ||||| |||||
Sbjct 908187 GTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCAGATAGAGTTCTTCCGTCTTCTAATTG 908128
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
||| |||||| | || | ||||||||| || || | |||||||| || ||| |
Sbjct 908127 TTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTT 908068
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
||| || | ||| ||||||| | ||| ||| | ||||| | || || ||
Sbjct 908067 AGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGT 908008
Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325
||| || || || || ||||||||
Sbjct 908007 CAAAGTCTTGACGAAGATTTGCAT 907984
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| ||||| ||||| ||||| ||||||||||||| | ||| | | |||||
Sbjct 908648 ACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCT 908589
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
|||||||| |||||| | || | ||||||||| || || | ||||| ||||| |
Sbjct 908588 AATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCTTGA 908529
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | ||| || | ||| ||||||| | ||| ||| | ||||| | ||
Sbjct 908528 ATCTTAGACTTCACATTATCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTA 908469
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| ||||| || || || || ||||||||
Sbjct 908468 CCTGTCAAAGTCTTGACGAAGATTTGCAT 908440
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
||||||||| ||||| ||||||||||||||||||| | ||| | | ||||| |||||
Sbjct 908415 GTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTG 908356
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
||| || ||| | || | ||||||||| || || | |||||||| || ||| |
Sbjct 908355 TTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTT 908296
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
|| || | ||| ||||||| | ||| ||| | ||||| | || || ||
Sbjct 908295 AGATTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGT 908236
Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325
||| || || || || ||||||||
Sbjct 908235 CAAAGTCTTGACGAAGATTTGCAT 908212
>seq3
Length=1564943
Score = 102 bits (112), Expect = 6e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || | |||||| | |||| |||||| || ||||| ||||| ||||||||||| | |
Sbjct 1518409 CCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 1518468
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| ||| ||| ||||||||||| || || ||| |||| | ||||||||| || ||
Sbjct 1518469 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 1518528
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| |||||||| || ||| | |||||| | ||| |||||| | ||| |
Sbjct 1518529 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACT 1518588
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAA 18317
|| | |||||| | || || ||||| || || || |||
Sbjct 1518589 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAAA 1518627
>seq5
Length=1351988
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| |||||| || ||||| ||||| ||||||||||| | || ||| ||| |||||||
Sbjct 1201220 ACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 1201161
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| ||
Sbjct 1201160 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGG 1201101
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||| | ||| ||| | ||| || | ||
Sbjct 1201100 ATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTA 1201041
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| || | || || || |||||||||||
Sbjct 1201040 CCAGTTAGGGTCTTGACGAAAATTTGCAT 1201012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343958390705
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |