Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq7 284 2e-71
seq3 199 5e-46
seq5 145 1e-29
>seq7
Length=940253
Score = 284 bits (314), Expect = 2e-71
Identities = 751/1141 (66%), Gaps = 18/1141 (2%)
Strand=Plus/Plus
Query 63019 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63078
|||||||||| || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 341297 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 341356
Query 63079 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63138
||||||| ||||||||||| | |||| ||| | || || | ||| | | ||||||
Sbjct 341357 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 341416
Query 63139 TTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTC 63196
| | | ||| || | | | |||||| ||||| | |||||| ||| || ||
Sbjct 341417 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 341474
Query 63197 GTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCC 63256
|| || |||||| || | || ||| | ||| | | ||| | ||| ||| |
Sbjct 341475 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 341534
Query 63257 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63316
|| | || |||| ||||| || ||||| || ||||| || ||| || | |||||
Sbjct 341535 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 341594
Query 63317 TGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63376
|| | ||| || || || |||||| | | |||| ||| | | ||||| ||
Sbjct 341595 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 341654
Query 63377 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63436
||||| || || | ||| | ||| | | ||||| | ||||| || || || || |
Sbjct 341655 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 341714
Query 63437 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63496
||| | ||| ||||| || |||| | | |||||||||||||||||| || |||| ||
Sbjct 341715 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 341774
Query 63497 GGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63556
||||| | || || || | | |||||| || ||| | ||| || || ||
Sbjct 341775 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 341834
Query 63557 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATC 63616
|| | |||||||| | || ||| || || ||||| || || ||||| ||| |||
Sbjct 341835 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 341894
Query 63617 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAA 63676
|| ||||| | ||| ||||| |||||||| || ||| ||| || ||||| ||
Sbjct 341895 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 341954
Query 63677 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63736
| || || |||||||| || || || || ||| | ||| ||||| || || | | |
Sbjct 341955 AAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 342014
Query 63737 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63796
|| ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 342015 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 342074
Query 63797 TTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63856
|||| ||| || ||| ||| | | |||||| || |||||| || || ||||| ||
Sbjct 342075 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 342134
Query 63857 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTT 63916
|||||| || || |||| ||||| | ||| | || || | |||| |||
Sbjct 342135 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATC------TTT 342188
Query 63917 GTTAACTATATCCATGGTA-ATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTT 63970
||| | || | ||| | | || | ||||| || || || || | ||| | ||
Sbjct 342189 GTTCTCCATGACGATGTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTT 342248
Query 63971 AGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTT 64030
|| || || | || | || || || | ||||| ||| | || | |||| |||
Sbjct 342249 TGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTT 342308
Query 64031 GTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGT 64090
||| | || || ||||| ||||| ||||| | | | || ||||| || || || ||
Sbjct 342309 GTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT 342368
Query 64091 ACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTAT 64149
|| || ||| | |||| || |||| | || ||||| || || ||||| || | ||
Sbjct 342369 -CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCAT 342427
Query 64150 A 64150
|
Sbjct 342428 A 342428
>seq3
Length=1564943
Score = 199 bits (220), Expect = 5e-46
Identities = 583/889 (66%), Gaps = 28/889 (3%)
Strand=Plus/Minus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|||||||| || ||| | |||||||| ||||| ||||| || |||| || || |||
Sbjct 416211 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 416152
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
||||| || || || || || || || ||||| ||| || || || || |
Sbjct 416151 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 416092
Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470
| ||| ||||| || ||||| | ||| ||||||| ||| ||||| || | ||
Sbjct 416091 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 416032
Query 33471 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529
||| || ||||| | | ||| | |||| ||| || || || | ||| || ||
Sbjct 416031 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 415973
Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGAT-------GTAAT--AAATGTTTAAACATCAA 33580
||| ||| || || ||||| || | ||||| | || | |||
Sbjct 415972 ---TCT------TTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAA 415922
Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640
||| || || ||| ||||| ||| || ||||| | ||| |||||||| || || || |
Sbjct 415921 ACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAA 415862
Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700
|| ||||| | || ||| || | ||| || |||| |||||| || || || || ||
Sbjct 415861 ACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAA 415802
Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---G 33757
| ||||| || ||||| || |||| | ||| || | || ||| ||||| |
Sbjct 415801 CACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACG 415742
Query 33758 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 33816
||||| || || ||||| | ||||| | ||| | || || ||||| |||||||
Sbjct 415741 AATCCATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCAT 415683
Query 33817 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 33876
| || | ||| | ||| ||| ||| || | ||||| || ||||| | |||
Sbjct 415682 TCAACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAG 415623
Query 33877 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33936
|||| || || |||||||| || || || || ||||||||||| | || || | ||
Sbjct 415622 TTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAA 415563
Query 33937 TCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTG 33996
| ||||| || | | | || ||| | || ||||| ||||| || ||||| || |
Sbjct 415562 TTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAG 415503
Query 33997 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCC 34053
|||| ||||| | || || ||| || | ||| ||| || || || ||||
Sbjct 415502 CAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCC 415443
Query 34054 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113
| |||| | ||| || || | ||| | |||||| | |||||||| || ||||| ||
Sbjct 415442 AGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTC 415383
Query 34114 TTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
| ||||| | |||||| || || || | ||||||||||| |||||
Sbjct 415382 TCTTATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 415334
>seq5
Length=1351988
Score = 145 bits (160), Expect = 1e-29
Identities = 218/308 (71%), Gaps = 4/308 (1%)
Strand=Plus/Minus
Query 63227 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63286
|||||| |||| | | ||||| ||| | | || | || |||| |||||| |||||
Sbjct 97103 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 97044
Query 63287 AGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTT 63346
|||||||| ||||| ||||| |||| | || ||| || ||||| ||||||
Sbjct 97043 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 96984
Query 63347 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA- 63405
| | || | | ||| | |||||||| |||||| |||||||||||||| || ||
Sbjct 96983 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATAT--ACAAAAG 96926
Query 63406 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63464
| ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | |
Sbjct 96925 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGC 96866
Query 63465 AACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCA 63524
| ||| |||| | ||| ||||| ||||||| | || |||||||| | ||| | ||
Sbjct 96865 AGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATAAGCACCATTTGCC 96806
Query 63525 CGAATATT 63532
| |||||
Sbjct 96805 CTTATATT 96798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817529145520
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