Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5 118 1e-21 >seq5 Length=1351988 Score = 118 bits (130), Expect = 1e-21 Identities = 365/554 (66%), Gaps = 22/554 (4%) Strand=Plus/Minus Query 37996 GACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTA 38055 ||||| ||||||| ||||| || |||| |||||| | ||| || | ||||| ||| | Sbjct 97084 GACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAA 97025 Query 38056 AATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCG 38115 ||||| ||| || || |||||| || || ||||||||||| || || || Sbjct 97024 AATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCA 96965 Query 38116 AATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCT 38175 | ||||| | ||||||||||| | || || | | || || || | ||| | || Sbjct 96964 ATAATATCCCCATGCCATGGTTCCAAGTATATACAAAAGGCACCAGGGCGTTTGTTCCCA 96905 Query 38176 CCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTA 38235 || |||| | |||||| ||||||| ||| | | | | |||||| |||| |||||| Sbjct 96904 CCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTT 96845 Query 38236 GATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATT--ACTTATCGACA 38293 || | || || || || ||||||| ||| || || | |||||| || || | Sbjct 96844 GAAGTACCATTCGACCCTGAGATATAAGCACCATTTGCCCTTATATTTGACACAT--GTA 96787 Query 38294 ATCCTATTCCACCTGCATG-TTTTGATATTAAAGC-GCATTGTTTTAACGTATCAAATAT 38351 ||| || ||||| | ||| |||||||| ||||| | ||| | ||| || | | | || Sbjct 96786 TTCCAATACCACCAG-ATGCCTTTGATATCAAAGCAGTCTTG-TGTAAAGTCTTATAAAT 96729 Query 38352 ACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACA---TTTGAGGCAA 38408 ||| || ||| ||| || | || | | | ||| || |||| |||| | Sbjct 96728 ACCATCAATAGAGTCTTCTTCCATAGCCACAAGAAAGCATGATGACAAATATTGATTTAC 96669 Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468 | || ||| || || || ||||| || || || || || | |||| ||| | || Sbjct 96668 T---GTACCGCTATTGAACAAAGTAGGTGAAGCGTGAATAAAATACTTTTGTGAC-ATTA 96613 Query 38469 ATT-ATATGTTTCTATTACATCATCTATATCA------CCGCCGTGAATACCTAGAGATA 38521 ||| || || || | ||| ||||||||||| ||||||||| | |||| | Sbjct 96612 ATTGGTAAGTCTCAAGTACTGCATCTATATCATTAAATGGTCCGTGAATAGCAAGAGCAA 96553 Query 38522 CCCTCATTAGCATA 38535 | ||||| | |||| Sbjct 96552 CTCTCATGAACATA 96539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524747290960