Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq3 105 7e-18
seq2 100 3e-16
seq7 98.7 1e-15
>seq3
Length=1564943
Score = 105 bits (116), Expect = 7e-18
Identities = 318/485 (66%), Gaps = 17/485 (4%)
Strand=Plus/Plus
Query 52565 AAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTC 52624
|||||| | | ||||| | | |||||| | ||| ||||| | || ||| |
Sbjct 415713 AAAAGGCTCAATGGGCCATTAGATGGATTCGTGATGACGAAGCCCTATACGCTGAAAGAT 415772
Query 52625 TGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTT 52684
|||| ||||| ||| ||||||||||||||||| || ||| || || || || || |
Sbjct 415773 TGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTCGCTGCCATCTTCT 415832
Query 52685 ACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCG 52744
| || | ||| | ||||| || | || || ||||| ||||| | | |
Sbjct 415833 GGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTGATTTGCAGAG 415892
Query 52745 ACGAAGGAATGCACACAGATTTTGCGTGTTTG-TATT--ATAATACGCGCGTTAAAGAAA 52801
| ||||| ||||||| || ||||| |||||| |||| || || || |||||
Sbjct 415893 ATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTATTCCATCAT-------TTGAAGAAC 415945
Query 52802 AATTGTCATATGAAAAAATTCTAGA---CATGTTTAAAGAGGCCGTCGACATTGAAAA-A 52857
|| | || || ||| ||| | || || | | ||| || || || || ||||| |
Sbjct 415946 AA--GCCAGATCCAAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCGAAAAGA 416003
Query 52858 GAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGC 52917
|| | || | |||||| ||||||| || | ||||| |||||||| ||||| |
Sbjct 416004 GA-TACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTGATGAAC 416062
Query 52918 GAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTAT 52977
| ||| |||| |||||||| |||||||| || | | ||| | |||||||||
Sbjct 416063 CAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAAGAAATACTAC 416122
Query 52978 AATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTT 53037
|| | |||||| || |||||| | ||||| || | | || ||||| || ||
Sbjct 416123 AACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAAACCAATTTC 416182
Query 53038 TTCGA 53042
|||||
Sbjct 416183 TTCGA 416187
>seq2
Length=1688883
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | ||| |||||||||| ||||| || ||||||||||| || |||
Sbjct 908438 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 908379
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || |||||| | |||||||||||| | |||| | ||| || || |||||
Sbjct 908378 AGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 908319
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| ||||| ||| | || | ||| | | || | ||||| | | || ||
Sbjct 908318 ATACCTTCCTTGTC-TTGAATCTTAGATTTCACATTGTCAATAGTGTCAGAAGATTCGAC 908260
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | ||||| || ||||| || || ||||| |||||||||
Sbjct 908259 TTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 908211
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | ||| |||||||||| ||||| || ||||||||||| || ||
Sbjct 908210 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCAGAT 908151
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || |||||| | |||||||| ||| | |||| | ||| || || |||||
Sbjct 908150 AGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGA 908091
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| ||||| ||| | || | || | | || | ||||| | | || ||
Sbjct 908090 ATACCTTCCTTGTC-TTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGAC 908032
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | ||||| || ||||| || || ||||| |||||||||
Sbjct 908031 TTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 907983
>seq7
Length=940253
Score = 98.7 bits (108), Expect = 1e-15
Identities = 576/900 (64%), Gaps = 29/900 (3%)
Strand=Plus/Plus
Query 153633 GCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTACTATTTCC 153692
|| || || |||||||| ||||| || ||||| || ||| | |||| || |||||
Sbjct 341221 GCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCA 341280
Query 153693 GCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTT-GATTGCTTTTGCGGTTACA 153751
|||||| || | || || || | ||| | |||| |||| || || ||||||
Sbjct 341281 CAACACAAGTTCGAAGACTTGAT-AGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACA 341339
Query 153752 AGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTATAATA--GTA 153809
||| ||||||||||||||| |||| || || ||||||| |||| ||| | ||| |||
Sbjct 341340 AGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTA 341399
Query 153810 CGCATCAA--TGTGACCGCGGGCATTTGATCGCGAAACTGGCCCTTGTCT-TCGTAGTGT 153866
| || ||| | ||| | | || | || | | | |||| ||| ||||| ||
Sbjct 341400 C-CA-CAACTTTTGAGCCTTGACAGTCTTTC---TACCACGGCCTTCTCTCTCGTAACGT 341454
Query 153867 TTGTACCAGTATTCAAACTCATCACC--AAACGTATTGTTAAGCTCGGGACATTCGTTGG 153924
| |||| | |||||| |||||||| |||| | || ||||| | || |||||| |
Sbjct 341455 TCGTACAATGCTTCAAATTCATCACCGTAAACAT-CTGGTAAGC-CTGGTGCTTCGTTTG 341512
Query 153925 GACACATCAGTGACC-ATCGGCCATTTTCTTGAACGCGACGCATAAATATATCGGGAACC 153983
|| | | || | || ||| | | |||| | || | ||| || | ||| || | |
Sbjct 341513 GAGAGAACAAAGTCCAATCTTCGTTCTTCTCG-ACTCTCTTCATGAAAAGATCTGGGATC 341571
Query 153984 CATAGGGCGTTCATCAGGTCGCGCGCTTTCGTGTCTTCGCTGCCAATGTTTCGACGCATG 154043
||||| || | || ||| | || | ||||| | || ||| | |||
Sbjct 341572 CATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATG 341631
Query 154044 TGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCTTGAGCGCCTTTA 154103
| | || ||| | || || | ||||| || || | ||| | || || ||
Sbjct 341632 TCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGT 341691
Query 154104 CGCTTG---CCGCCCTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAGCATGGGT 154160
| |||| || || || | |||| ||| | | ||||||||||| |||| ||| ||
Sbjct 341692 CTCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGA 341751
Query 154161 AGCAGACCGCTGGCGGTACCGTTTGTAGATTTAATCTTGCTGTTGCGG--CCTCGAACGC 154218
| | |||| | | |||||||| ||| ||| | | ||| |||| |
Sbjct 341752 ATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGT--AAGAACCGGTAGAACGAATGT 341809
Query 154219 TGTTTACGTTTAATCCAATACCGCCGCCGTGTTTGGAGATCATGGCGCAATCGTTCAATG 154278
||| | || || |||||||| || || || ||||||||||| || || ||||| |
Sbjct 341810 TGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAG 341869
Query 154279 TGTTATAGATACCACGAATGCTATCGCTTTCCATGGTCAATAGGAAACATGAACTCATCT 154338
||| || ||||| |||| ||| | ||||| || |||||||||||| ||| |
Sbjct 341870 TGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTT 341929
Query 154339 GCGGAGTTGGAGTGCCGGCAGCAAACATGGTCGGGCTTGCGTGCGTGTA-CATCTTTGTG 154397
| ||| ||||| || ||| || | || || ||||| ||| | ||||| | |
Sbjct 341930 GTGGATGAGGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAG 341989
Query 154398 CTCAAAAATTTATAAGACTTTATGGCATTATCAATGTCGTCT-CCAAAGATACCTAGAGC 154456
|| | || |||| | | | || ||||| || ||| || |||||| | |||
Sbjct 341990 -ACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATC-TCTACCGTGGATACCGACAGC 342047
Query 154457 TATACGCATGTGCATGTGTTGAATCCTTTCGGCAACTTTTTCGTTAATTTTTATCAGGTA 154516
| | |||| |||||||||| | ||| ||||| || |||| ||| ||| || |||
Sbjct 342048 CACTCTCATGATCATGTGTTGAGGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTA 342107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063944192800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |