Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq3 132 5e-26
>seq3
Length=1564943
Score = 132 bits (146), Expect = 5e-26
Identities = 461/710 (65%), Gaps = 12/710 (2%)
Strand=Plus/Minus
Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443
||||| ||||| || || || |||||||| ||| || || ||||||||||| ||||||
Sbjct 416196 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 416137
Query 13444 GGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAAT 13502
|| || || ||| | | ||| | ||||| | | | || ||| || ||||
Sbjct 416136 GGGTTAGT-GACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAAC 416078
Query 13503 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTAT 13562
||| || | ||||| ||| |||||| |||||||| | ||| || || | |
Sbjct 416077 AAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAG-AG 416019
Query 13563 ATTAGTTAAAAATTCT-TTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGT 13621
| | | || ||| ||||| || ||||| || | || || | | | ||| |
Sbjct 416018 CGTCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAATCT 415959
Query 13622 CATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAG 13679
|| || | | || | | ||| | || | ||||| ||||| || || |
Sbjct 415958 --TTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAA 415901
Query 13680 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739
|| |||||||| | ||| | ||||||||| || || || ||||||||||| || ||
Sbjct 415900 ACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTT 415841
Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799
|| ||||| || || |||||||| || || || || || | || || || ||||| ||
Sbjct 415840 CTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAA 415781
Query 13800 CGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859
||| | | || ||| | | |||| | | |||||| | | |||||||
Sbjct 415780 CGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATCTAATGGCCCATTG 415721
Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTT 13919
|| |||| ||| || || ||||| || ||||| || || || | || ||
Sbjct 415720 AGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAAGTCGTGTTCCTT 415661
Query 13920 AG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCT 13977
|| | |||| ||||| || ||||| | || ||| |||| ||||| ||||||||
Sbjct 415660 AGGATCCTTG--ATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTTTCC 415603
Query 13978 ATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAAT 14037
|| || || ||||| || ||||| | ||||||| ||| ||||| | | ||
Sbjct 415602 ATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAGAAG 415543
Query 14038 CTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGC 14087
|||| |||||||||| || || |||||||| ||| ||||| || ||
Sbjct 415542 TTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGC 415493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588746158760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |