Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq3 132 5e-26 >seq3 Length=1564943 Score = 132 bits (146), Expect = 5e-26 Identities = 461/710 (65%), Gaps = 12/710 (2%) Strand=Plus/Minus Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443 ||||| ||||| || || || |||||||| ||| || || ||||||||||| |||||| Sbjct 416196 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 416137 Query 13444 GGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAAT 13502 || || || ||| | | ||| | ||||| | | | || ||| || |||| Sbjct 416136 GGGTTAGT-GACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAAC 416078 Query 13503 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTAT 13562 ||| || | ||||| ||| |||||| |||||||| | ||| || || | | Sbjct 416077 AAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAG-AG 416019 Query 13563 ATTAGTTAAAAATTCT-TTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGT 13621 | | | || ||| ||||| || ||||| || | || || | | | ||| | Sbjct 416018 CGTCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAATCT 415959 Query 13622 CATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAG 13679 || || | | || | | ||| | || | ||||| ||||| || || | Sbjct 415958 --TTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAA 415901 Query 13680 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739 || |||||||| | ||| | ||||||||| || || || ||||||||||| || || Sbjct 415900 ACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTT 415841 Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799 || ||||| || || |||||||| || || || || || | || || || ||||| || Sbjct 415840 CTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAA 415781 Query 13800 CGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859 ||| | | || ||| | | |||| | | |||||| | | ||||||| Sbjct 415780 CGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATCTAATGGCCCATTG 415721 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTT 13919 || |||| ||| || || ||||| || ||||| || || || | || || Sbjct 415720 AGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAAGTCGTGTTCCTT 415661 Query 13920 AG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCT 13977 || | |||| ||||| || ||||| | || ||| |||| ||||| |||||||| Sbjct 415660 AGGATCCTTG--ATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTTTCC 415603 Query 13978 ATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAAT 14037 || || || ||||| || ||||| | ||||||| ||| ||||| | | || Sbjct 415602 ATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAGAAG 415543 Query 14038 CTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGC 14087 |||| |||||||||| || || |||||||| ||| ||||| || || Sbjct 415542 TTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGC 415493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588746158760