Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq7 233 3e-56
seq3 163 4e-35
seq5 161 1e-34
>seq7
Length=940253
Score = 233 bits (258), Expect = 3e-56
Identities = 742/1142 (65%), Gaps = 20/1142 (2%)
Strand=Plus/Plus
Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833
||||||| || || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 341297 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 341356
Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 71893
| || || ||||||||||| | |||| ||| | || || | ||| | | ||||||
Sbjct 341357 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 341416
Query 71894 TTATTATATTCTTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTC 71951
| | | || | || | | |||||| ||||| || || ||| ||| || ||
Sbjct 341417 TGACAGTCTT--TCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 341474
Query 71952 GTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCC 72011
|| || || ||| ||| || || ||| || ||| | | ||| | ||| ||| |
Sbjct 341475 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 341534
Query 72012 ATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 72071
| | | |||| ||||| || ||||| || ||||| || ||| || | |||||
Sbjct 341535 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 341594
Query 72072 GGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 72131
| | || || || || |||||| | | |||| ||| | | ||||| ||
Sbjct 341595 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 341654
Query 72132 ATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTAT 72191
||||| || || | ||| | ||| | | || || | ||||| || || || || |
Sbjct 341655 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 341714
Query 72192 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATT 72251
||| | ||| ||||| || |||| | | ||||||||||||||| || || | ||| ||
Sbjct 341715 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 341774
Query 72252 GGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCC 72311
|| || | || || || | | |||||| ||| ||| | ||| || || ||
Sbjct 341775 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 341834
Query 72312 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 72371
|| | |||||||| | || ||| || || || || || || || || || |||
Sbjct 341835 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 341894
Query 72372 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 72431
||| ||||| | ||| ||||| |||||||| || || ||| || ||||| ||
Sbjct 341895 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 341954
Query 72432 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGC 72491
| || || |||||||| || || || || ||||| ||| ||||| || || | | |
Sbjct 341955 AAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 342014
Query 72492 TGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCT 72551
||| ||||| | || || || || || || | ||| | ||| || ||||| |
Sbjct 342015 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 342074
Query 72552 TTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 72611
|||| | | ||| || ||| | | |||||| || |||||| || || ||||| ||
Sbjct 342075 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 342134
Query 72612 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTT 72671
|||||| || || |||| ||||| | ||| || | ||||| | ||| |||
Sbjct 342135 GTAGTTGAATTGGAAATCTCTGTCGTAGACAAT---CGCA--GAGTTCA-AAGTATCTTT 342188
Query 72672 GTTAACTATATCCATGGTGATAC-------TTGAAATAATCGGAGAATGTTTCCCATTTT 72724
||| | || | || || |||| ||||| || || || || | ||| | |
Sbjct 342189 GTTCTCCATGACGAT-GTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCT 342247
Query 72725 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 72784
| || || || | || | || || || | ||||| ||| | || | |||| ||
Sbjct 342248 TTGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCT 342307
Query 72785 TGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAG 72844
|||| | || || | ||| ||||| ||||| | | | || |||||||| || || |
Sbjct 342308 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGG 342367
Query 72845 TACAAGT-GGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 72903
| || || ||| | |||| || |||| | || ||||| || || ||||| || | |
Sbjct 342368 T-CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCA 342426
Query 72904 TA 72905
||
Sbjct 342427 TA 342428
>seq3
Length=1564943
Score = 163 bits (180), Expect = 4e-35
Identities = 574/885 (65%), Gaps = 20/885 (2%)
Strand=Plus/Minus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|||||||| || ||| | |||||||| ||||| || || || |||| || || |||
Sbjct 416211 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 416152
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893
||||| || || || || || || || || || ||| || || || || |
Sbjct 416151 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 416092
Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953
| ||| ||||| | ||||| | ||| ||||||| ||| ||||| || | ||
Sbjct 416091 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 416032
Query 41954 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012
||| || ||||| | | ||| | |||| ||| || || || ||||| || ||
Sbjct 416031 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 415973
Query 42013 AGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATG 42068
|||| || | | | | || | | | | | ||||| | || | |||||| |
Sbjct 415972 ---TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGG 415917
Query 42069 CGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 42128
| || ||| ||||| ||| |||||||| | ||| |||||||| || || || | || |
Sbjct 415916 CAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTG 415857
Query 42129 GCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTC 42188
|||| | || ||| || | ||| || || | || || || ||||| || || | |
Sbjct 415856 GCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACAC 415797
Query 42189 CTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCC 42245
|||| || || || || |||| | ||| || | || ||| ||||| | ||||
Sbjct 415796 CTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCC 415737
Query 42246 A-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 42304
| || || ||||| | ||||| | ||| | || || ||||| |||||||| ||
Sbjct 415736 ATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAAC 415678
Query 42305 AGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCT 42364
| ||| | ||| ||| ||| || | || || || ||||| | ||| ||||
Sbjct 415677 AAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCG 415618
Query 42365 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGT 42424
|| || |||||||| || || || || ||||||||||| |||| || | || ||
Sbjct 415617 GAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGC 415558
Query 42425 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAA 42484
|| || | | | || ||| | || ||||||||||| || || || || |||||
Sbjct 415557 ACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAG 415498
Query 42485 AACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCAATC 42540
||||| | || || ||| || | |||| | ||| || || ||||| ||
Sbjct 415497 AACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCTGTTGTTCCAGTC 415439
Query 42541 ATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTT 42600
|| | ||| || || | ||| | |||||| | |||||||| || || || || | ||
Sbjct 415438 ATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTT 415379
Query 42601 ATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645
||| | |||||| || || || | |||||||||| |||||
Sbjct 415378 ATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 415334
>seq5
Length=1351988
Score = 161 bits (178), Expect = 1e-34
Identities = 596/919 (65%), Gaps = 35/919 (4%)
Strand=Plus/Minus
Query 71373 TGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAA 71432
|||||||| | | ||||| | || | ||| || || |||||| | ||||| |
Sbjct 97727 TGATCCTGGGAAACTTTCGTAGTGGCCATATTTCTCAGCGAGTTCAATAGATGCCTCAAT 97668
Query 71433 TGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGT-GCTTCCGGGCTAT 71491
||| ||| ||||| ||||| || |||| ||||| | || | | || || |
Sbjct 97667 TGCGGCATGGTAAATAGTTTCAAATATCTGTTTATTCA-ATGTGGCAGCATCTTCTGATT 97609
Query 71492 CAAATGGATAATTTA-AGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATA 71550
|||| || | | || |||| ||||| || ||||| | ||||||||| |||||| | |
Sbjct 97608 CAAAGGG-TGTTCTACAGAGCATAAAAGCATCTGCAAGTCCTTGAACACCAATAGCTAAT 97550
Query 71551 GGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 71610
|||| |||||| || ||| || ||||| ||||| ||| || |||||||
Sbjct 97549 GGTCGGTGTCTTAAGTTGCCTCTTTTTGCCTCTGGGATAGGGTAAGCTCCAACATCTATA 97490
Query 71611 ATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT 71670
|| ||| ||||| || || | ||||| || ||| | || | | ||| ||||||
Sbjct 97489 GTTCTATCTAGATTCCTAACCAACACTTTAACAACACGATGAAGAGTTACAAAGTCAAAT 97430
Query 71671 CTCC------CATC------TATT---ACAAAC--ACGTTCAAGGCAACAGATGCCAGAT 71713
|||| |||| || || | || | || || ||||| ||||
Sbjct 97429 ACAGGAGAATCATCAGAAGTTATTTTGACGTACGTAGGT--AGTGCGACTGATGCAAGAT 97372
Query 71714 TACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTAC 71773
| || || ||||| || | | ||| | | |||||| |||||||||
Sbjct 97371 TGCAGACTGCTACTTCCTCTGGTGAACTATACTCCACGATTTCACAACAAAGATTAGACG 97312
Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833
|||| ||| ||||| |||| || || ||| | || || | |||||||||||| |
Sbjct 97311 ACTTAATGACACCTAAGTTTTTCTGGTTGGACTTCTCATTGCATGAATCCTTATAAAGCA 97252
Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 71893
| || ||| || || || | ||| || || ||| | ||| | | | || |
Sbjct 97251 TGAAAGGAACTCCTGTCTCCGTTTGACTTTGTAGAATTTCCGACCAAATTTGTTGCGCTT 97192
Query 71894 TTATTATATTC-TTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCG 71952
| ||| | ||| ||| | || ||||| || || | | ||||| || ||||||
Sbjct 97191 TCATTTTTTTCATTGGAA-TCAATTCTCGCTCATACTTTTCATATAGGGTTTTGAACTC- 97134
Query 71953 TCTCCCCAAGCATTGTC---TAATCCAGGACATTCATTCGGACACATCAATGACCACTCT 72009
| | || |||| ||| ||| || | ||||| |||| | | ||||| |||
Sbjct 97133 TGTACCATAGCA--GTCAGATAAACCTGTTGCTTCATCTGGACTAAAAATGGACCAATCT 97076
Query 72010 CCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCT 72069
||| || | || |||| |||||| ||||| |||||||| ||||| ||||| |||
Sbjct 97075 TCATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCT 97016
Query 72070 CTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 72129
| || || || || ||||| ||||||| | || | | ||| | ||||||||
Sbjct 97015 CGGGCCCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCC 96956
Query 72130 GAATGCCACGGTTCCAAGTATATGGCCATAA--CTCCCGGCCGTTTGTTTCCTCCCTGAT 72187
|||||| |||||||||||||| || || | || || |||||||| || || ||||
Sbjct 96955 CCATGCCATGGTTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGAT 96898
Query 72188 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCAC 72247
| | ||||| || ||||| ||| |||| | || ||| |||| | |||||| || | ||
Sbjct 96897 CGACATATCTTGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGAAGTAC 96838
Query 72248 CATTGGTCCCGGAGATATA 72266
|||| | ||| ||||||||
Sbjct 96837 CATTCGACCCTGAGATATA 96819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139124496840
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