Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq7 233 3e-56 seq3 163 4e-35 seq5 161 1e-34 >seq7 Length=940253 Score = 233 bits (258), Expect = 3e-56 Identities = 742/1142 (65%), Gaps = 20/1142 (2%) Strand=Plus/Plus Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833 ||||||| || || || || | |||||||||||| |||||||| |||||||| || || | Sbjct 341297 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 341356 Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 71893 | || || ||||||||||| | |||| ||| | || || | ||| | | |||||| Sbjct 341357 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 341416 Query 71894 TTATTATATTCTTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTC 71951 | | | || | || | | |||||| ||||| || || ||| ||| || || Sbjct 341417 TGACAGTCTT--TCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 341474 Query 71952 GTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCC 72011 || || || ||| ||| || || ||| || ||| | | ||| | ||| ||| | Sbjct 341475 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 341534 Query 72012 ATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 72071 | | | |||| ||||| || ||||| || ||||| || ||| || | ||||| Sbjct 341535 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 341594 Query 72072 GGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 72131 | | || || || || |||||| | | |||| ||| | | ||||| || Sbjct 341595 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 341654 Query 72132 ATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTAT 72191 ||||| || || | ||| | ||| | | || || | ||||| || || || || | Sbjct 341655 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 341714 Query 72192 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATT 72251 ||| | ||| ||||| || |||| | | ||||||||||||||| || || | ||| || Sbjct 341715 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 341774 Query 72252 GGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCC 72311 || || | || || || | | |||||| ||| ||| | ||| || || || Sbjct 341775 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 341834 Query 72312 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 72371 || | |||||||| | || ||| || || || || || || || || || ||| Sbjct 341835 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 341894 Query 72372 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 72431 ||| ||||| | ||| ||||| |||||||| || || ||| || ||||| || Sbjct 341895 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 341954 Query 72432 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGC 72491 | || || |||||||| || || || || ||||| ||| ||||| || || | | | Sbjct 341955 AAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 342014 Query 72492 TGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCT 72551 ||| ||||| | || || || || || || | ||| | ||| || ||||| | Sbjct 342015 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 342074 Query 72552 TTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 72611 |||| | | ||| || ||| | | |||||| || |||||| || || ||||| || Sbjct 342075 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 342134 Query 72612 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTT 72671 |||||| || || |||| ||||| | ||| || | ||||| | ||| ||| Sbjct 342135 GTAGTTGAATTGGAAATCTCTGTCGTAGACAAT---CGCA--GAGTTCA-AAGTATCTTT 342188 Query 72672 GTTAACTATATCCATGGTGATAC-------TTGAAATAATCGGAGAATGTTTCCCATTTT 72724 ||| | || | || || |||| ||||| || || || || | ||| | | Sbjct 342189 GTTCTCCATGACGAT-GTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCT 342247 Query 72725 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 72784 | || || || | || | || || || | ||||| ||| | || | |||| || Sbjct 342248 TTGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCT 342307 Query 72785 TGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAG 72844 |||| | || || | ||| ||||| ||||| | | | || |||||||| || || | Sbjct 342308 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGG 342367 Query 72845 TACAAGT-GGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 72903 | || || ||| | |||| || |||| | || ||||| || || ||||| || | | Sbjct 342368 T-CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCA 342426 Query 72904 TA 72905 || Sbjct 342427 TA 342428 >seq3 Length=1564943 Score = 163 bits (180), Expect = 4e-35 Identities = 574/885 (65%), Gaps = 20/885 (2%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| || ||| | |||||||| ||||| || || || |||| || || ||| Sbjct 416211 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 416152 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||| || || || || || || || || || ||| || || || || | Sbjct 416151 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 416092 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | ||| ||||| | ||||| | ||| ||||||| ||| ||||| || | || Sbjct 416091 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 416032 Query 41954 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 ||| || ||||| | | ||| | |||| ||| || || || ||||| || || Sbjct 416031 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 415973 Query 42013 AGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATG 42068 |||| || | | | | || | | | | | ||||| | || | |||||| | Sbjct 415972 ---TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGG 415917 Query 42069 CGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 42128 | || ||| ||||| ||| |||||||| | ||| |||||||| || || || | || | Sbjct 415916 CAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTG 415857 Query 42129 GCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTC 42188 |||| | || ||| || | ||| || || | || || || ||||| || || | | Sbjct 415856 GCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACAC 415797 Query 42189 CTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCC 42245 |||| || || || || |||| | ||| || | || ||| ||||| | |||| Sbjct 415796 CTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCC 415737 Query 42246 A-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 42304 | || || ||||| | ||||| | ||| | || || ||||| |||||||| || Sbjct 415736 ATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAAC 415678 Query 42305 AGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCT 42364 | ||| | ||| ||| ||| || | || || || ||||| | ||| |||| Sbjct 415677 AAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCG 415618 Query 42365 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGT 42424 || || |||||||| || || || || ||||||||||| |||| || | || || Sbjct 415617 GAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGC 415558 Query 42425 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAA 42484 || || | | | || ||| | || ||||||||||| || || || || ||||| Sbjct 415557 ACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAG 415498 Query 42485 AACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCAATC 42540 ||||| | || || ||| || | |||| | ||| || || ||||| || Sbjct 415497 AACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCTGTTGTTCCAGTC 415439 Query 42541 ATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTT 42600 || | ||| || || | ||| | |||||| | |||||||| || || || || | || Sbjct 415438 ATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTT 415379 Query 42601 ATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 ||| | |||||| || || || | |||||||||| ||||| Sbjct 415378 ATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 415334 >seq5 Length=1351988 Score = 161 bits (178), Expect = 1e-34 Identities = 596/919 (65%), Gaps = 35/919 (4%) Strand=Plus/Minus Query 71373 TGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAA 71432 |||||||| | | ||||| | || | ||| || || |||||| | ||||| | Sbjct 97727 TGATCCTGGGAAACTTTCGTAGTGGCCATATTTCTCAGCGAGTTCAATAGATGCCTCAAT 97668 Query 71433 TGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGT-GCTTCCGGGCTAT 71491 ||| ||| ||||| ||||| || |||| ||||| | || | | || || | Sbjct 97667 TGCGGCATGGTAAATAGTTTCAAATATCTGTTTATTCA-ATGTGGCAGCATCTTCTGATT 97609 Query 71492 CAAATGGATAATTTA-AGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATA 71550 |||| || | | || |||| ||||| || ||||| | ||||||||| |||||| | | Sbjct 97608 CAAAGGG-TGTTCTACAGAGCATAAAAGCATCTGCAAGTCCTTGAACACCAATAGCTAAT 97550 Query 71551 GGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 71610 |||| |||||| || ||| || ||||| ||||| ||| || ||||||| Sbjct 97549 GGTCGGTGTCTTAAGTTGCCTCTTTTTGCCTCTGGGATAGGGTAAGCTCCAACATCTATA 97490 Query 71611 ATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT 71670 || ||| ||||| || || | ||||| || ||| | || | | ||| |||||| Sbjct 97489 GTTCTATCTAGATTCCTAACCAACACTTTAACAACACGATGAAGAGTTACAAAGTCAAAT 97430 Query 71671 CTCC------CATC------TATT---ACAAAC--ACGTTCAAGGCAACAGATGCCAGAT 71713 |||| |||| || || | || | || || ||||| |||| Sbjct 97429 ACAGGAGAATCATCAGAAGTTATTTTGACGTACGTAGGT--AGTGCGACTGATGCAAGAT 97372 Query 71714 TACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTAC 71773 | || || ||||| || | | ||| | | |||||| ||||||||| Sbjct 97371 TGCAGACTGCTACTTCCTCTGGTGAACTATACTCCACGATTTCACAACAAAGATTAGACG 97312 Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833 |||| ||| ||||| |||| || || ||| | || || | |||||||||||| | Sbjct 97311 ACTTAATGACACCTAAGTTTTTCTGGTTGGACTTCTCATTGCATGAATCCTTATAAAGCA 97252 Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 71893 | || ||| || || || | ||| || || ||| | ||| | | | || | Sbjct 97251 TGAAAGGAACTCCTGTCTCCGTTTGACTTTGTAGAATTTCCGACCAAATTTGTTGCGCTT 97192 Query 71894 TTATTATATTC-TTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCG 71952 | ||| | ||| ||| | || ||||| || || | | ||||| || |||||| Sbjct 97191 TCATTTTTTTCATTGGAA-TCAATTCTCGCTCATACTTTTCATATAGGGTTTTGAACTC- 97134 Query 71953 TCTCCCCAAGCATTGTC---TAATCCAGGACATTCATTCGGACACATCAATGACCACTCT 72009 | | || |||| ||| ||| || | ||||| |||| | | ||||| ||| Sbjct 97133 TGTACCATAGCA--GTCAGATAAACCTGTTGCTTCATCTGGACTAAAAATGGACCAATCT 97076 Query 72010 CCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCT 72069 ||| || | || |||| |||||| ||||| |||||||| ||||| ||||| ||| Sbjct 97075 TCATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCT 97016 Query 72070 CTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 72129 | || || || || ||||| ||||||| | || | | ||| | |||||||| Sbjct 97015 CGGGCCCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCC 96956 Query 72130 GAATGCCACGGTTCCAAGTATATGGCCATAA--CTCCCGGCCGTTTGTTTCCTCCCTGAT 72187 |||||| |||||||||||||| || || | || || |||||||| || || |||| Sbjct 96955 CCATGCCATGGTTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGAT 96898 Query 72188 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCAC 72247 | | ||||| || ||||| ||| |||| | || ||| |||| | |||||| || | || Sbjct 96897 CGACATATCTTGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGAAGTAC 96838 Query 72248 CATTGGTCCCGGAGATATA 72266 |||| | ||| |||||||| Sbjct 96837 CATTCGACCCTGAGATATA 96819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139124496840