Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2 123 3e-23 seq3 120 3e-22 >seq2 Length=1688883 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| || | ||| ||||| |||| ||||||||| ||||| |||||||| ||| Sbjct 908438 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 908379 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || |||||| | ||||||||||||| | |||| | ||| || || ||||| Sbjct 908378 AGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 908319 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| ||| || ||| | | || | ||||| | | ||| ||| Sbjct 908318 ATACCTTCCTTGTCTTGAATCTTAGATTTCACATTGTCAATAGTGTCAGAAGATTCGACT 908259 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | ||| | ||||| || ||||| || || ||||| ||||||||| Sbjct 908258 TCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 908211 >seq3 Length=1564943 Score = 120 bits (132), Expect = 3e-22 Identities = 296/436 (68%), Gaps = 15/436 (3%) Strand=Plus/Plus Query 50410 GCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCA 50469 || ||| | || || ||||| || || |||||||||||||| || ||| ||| || Sbjct 415763 GCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTCGCT 415822 Query 50470 GCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTG 50529 ||||| || | | || | || | ||||| || | || || ||||| ||| Sbjct 415823 GCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTG 415882 Query 50530 ATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTA 50589 |||| | || ||||| ||||||| |||||||| |||||| | | || | | Sbjct 415883 ATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTATTCCAT---CATTTG 415939 Query 50590 AATGAAAAATTATCATACGAAACAATTTTGGAC--ATGTTCAAAGAAGCCGTCGACATCG 50647 || ||| || || | ||| | | | | | || ||| |||||| || || |||| Sbjct 415940 AA-GAACAAGCCAGATCC-AAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCG 415997 Query 50648 AAAAAGAGTTT-TTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATG 50706 |||| ||| | |||| |||||| ||||||| | | ||||| |||||||| || || Sbjct 415998 AAAA-GAGATACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTG 416056 Query 50707 ATGTGCGAGTACATTGAGTTTGTTGCAGACAGA-TTGTTGTTGCAGCTGG-GACAACCGA 50764 ||| | | ||| | || ||||||||||||||| | | ||||| || |||| || Sbjct 416057 ATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAA--GA 416114 Query 50765 AATACTATAATG-CACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAA 50823 ||||||| || | ||| |||||| || |||||| | ||||| || |||| || ||| Sbjct 416115 AATACTACAACGTCAC-TAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAA 416173 Query 50824 ACAAACTTTTTCGAAA 50839 || || || ||||||| Sbjct 416174 ACCAATTTCTTCGAAA 416189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014342960880