Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq3 178 1e-39 >seq3 Length=1564943 Score = 178 bits (196), Expect = 1e-39 Identities = 547/835 (66%), Gaps = 31/835 (4%) Strand=Plus/Minus Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934 ||||| ||||| || || || ||||| || | || ||||| ||||||||||| ||||| Sbjct 416196 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 416137 Query 12935 GGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACA 12994 || || | |||||||| || ||||| | | | | |||||| |||||| Sbjct 416136 GGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAACA 416077 Query 12995 AACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCT 13054 || || | ||| || ||||| |||||| |||||| || | || || || | ||| Sbjct 416076 AATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCG 416017 Query 13055 TCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGTTC 13114 || | || | | ||||| || ||||| ||||| | | || |||| || || Sbjct 416016 TCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT---TCTTTCGACAATC 415960 Query 13115 TCTAATGGAG--GATTTGAT----AGATGCTTAAACATCATACATGCAAAATCACAGTGC 13168 | | ||| | ||| | | ||| | || | || ||| ||||| || |||| Sbjct 415959 TTT---GGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGC 415903 Query 13169 AATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCAT-AAGCCCTCG 13227 || ||||||||||| | || | |||||||| || || | ||| ||||| || |||| Sbjct 415902 AAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTC 415843 Query 13228 TTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGC 13287 || || || ||| || || ||||| || ||||| || ||||| | ||||| || || || Sbjct 415842 TTCTTCAA-CCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGC 415784 Query 13288 AAACGCTATCAACCTTTCACCATACGTA-CTATTTTTACTCTC-TATCCACTTTCTGGCC 13345 ||||| | ||| |||||| | || || || | || | ||||| | ||||| Sbjct 415783 GAACGCAACCAATCTTTCAGCGTA--TAGGGCTTCGTCATCACGAATCCATCTAATGGCC 415726 Query 13346 CAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAtttttt 13405 || | || |||| ||| | || |||| || || || || || | | | | Sbjct 415725 CATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAAGTCGTGT 415666 Query 13406 tCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTT 13465 |||||| || || ||||| || ||||| || ||| |||| || || || ||| Sbjct 415665 TCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTT 415606 Query 13466 TCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAA 13525 |||||| ||||||||||| || ||||| | || |||| | || || || | | Sbjct 415605 TCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAG 415546 Query 13526 AATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAG---T 13582 || |||| | ||||||||||| || || || || ||||||||| || ||||| | Sbjct 415545 AAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACT 415486 Query 13583 ATGTGCTTAATAAAt---tttttttCGTT--TTCTGACAACTTTAACCAATCTGGAAAAT 13637 || | | |||| | || ||||| ||||| || ||| || ||| || Sbjct 415485 CTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTG-----TTGTTCCAGTCATGAAGAT 415431 Query 13638 CTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATA 13692 | || || ||||| | || ||| | ||||||||||| || | || ||||||| Sbjct 415430 CCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATA 415376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982352726618