Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq8 134 2e-27
seq6 109 9e-20
>seq8
Length=945852
Score = 134 bits (148), Expect = 2e-27
Identities = 192/268 (72%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | |||| || |||||||||||||||| |||||||||||||||||
Sbjct 275080 GCCAAGCGTCACAGAAAGATC-CTCAGAGATAACATCCAAGGTATCACCAAGCCAGCTAT 275022
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | |||| | | ||||| ||||||||| | || || ||| |||| ||||| |
Sbjct 275021 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATTTCCGGTTTGATCTACGAAGAAGT 274962
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | ||| | |||| ||| | | | |||||| |||||| || || || ||
Sbjct 274961 CCGTAACGTTCTAAAGACTTTCTTGGAATCTGTTATCAGAGATGCTGTCACATACACTGA 274902
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| ||||| | ||| |||| || || ||||| | |||||
Sbjct 274901 ACACGCCAAGAGAAAGACTGTTACCTCTCTCGATGTCGTTTACGCTTTGAAGAGACAAGG 274842
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | |||||||| || |||||
Sbjct 274841 TAGAACTTTGTATGGTTTCGGTGGTTAA 274814
>seq6
Length=1212614
Score = 109 bits (120), Expect = 9e-20
Identities = 186/267 (70%), Gaps = 2/267 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | |||| || |||||||||||||||| |||||||||||||| ||
Sbjct 296989 GCCAAGCGTCACAGAAAGATC-CTCAGAGATAACATCCAAGGTATCACCAAGCCAGCCAT 296931
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | |||| | | ||||| ||||||||| | || || ||| |||| ||||| |
Sbjct 296930 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATTTCCGGTTTGATCTACGAAGAAGT 296871
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | ||| | |||| ||| | | |||| ||| || || || || || ||
Sbjct 296870 CCGTAACGTTCTAAAGACTTTCTTGGAATCCGTCATCAGAGACGCCGTCACATACACTGA 296811
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || | ||| | || || || ||||| | |||||
Sbjct 296810 ACACGCCAAGAGAAAGACTGTTACTTCTCTCGATGTTGTGTACGCCTTGAAGAGACAAGG 296751
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698
| | | |||||||| || ||||
Sbjct 296750 TAGAACTTTGTATGGTTTCGGTGGTTA 296724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075191771237
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |