Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8 134 2e-27 seq6 109 9e-20 >seq8 Length=945852 Score = 134 bits (148), Expect = 2e-27 Identities = 192/268 (72%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | |||| || |||||||||||||||| ||||||||||||||||| Sbjct 275080 GCCAAGCGTCACAGAAAGATC-CTCAGAGATAACATCCAAGGTATCACCAAGCCAGCTAT 275022 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| ||||||||| | || || ||| |||| ||||| | Sbjct 275021 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATTTCCGGTTTGATCTACGAAGAAGT 274962 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| | |||| ||| | | | |||||| |||||| || || || || Sbjct 274961 CCGTAACGTTCTAAAGACTTTCTTGGAATCTGTTATCAGAGATGCTGTCACATACACTGA 274902 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| ||||| | ||| |||| || || ||||| | ||||| Sbjct 274901 ACACGCCAAGAGAAAGACTGTTACCTCTCTCGATGTCGTTTACGCTTTGAAGAGACAAGG 274842 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 274841 TAGAACTTTGTATGGTTTCGGTGGTTAA 274814 >seq6 Length=1212614 Score = 109 bits (120), Expect = 9e-20 Identities = 186/267 (70%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | |||| || |||||||||||||||| |||||||||||||| || Sbjct 296989 GCCAAGCGTCACAGAAAGATC-CTCAGAGATAACATCCAAGGTATCACCAAGCCAGCCAT 296931 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| ||||||||| | || || ||| |||| ||||| | Sbjct 296930 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATTTCCGGTTTGATCTACGAAGAAGT 296871 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| | |||| ||| | | |||| ||| || || || || || || Sbjct 296870 CCGTAACGTTCTAAAGACTTTCTTGGAATCCGTCATCAGAGACGCCGTCACATACACTGA 296811 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || | ||| | || || || ||||| | ||||| Sbjct 296810 ACACGCCAAGAGAAAGACTGTTACTTCTCTCGATGTTGTGTACGCCTTGAAGAGACAAGG 296751 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698 | | | |||||||| || |||| Sbjct 296750 TAGAACTTTGTATGGTTTCGGTGGTTA 296724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075191771237