Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq3 122 9e-23 >seq3 Length=1564943 Score = 122 bits (134), Expect = 9e-23 Identities = 344/530 (65%), Gaps = 7/530 (1%) Strand=Plus/Minus Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531 |||||| ||||| || |||||||||||||| || | || ||||| || || || || Sbjct 415924 CAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGT 415865 Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAA 21591 ||||| ||||| || || |||| || ||||| || || | || || | || || || Sbjct 415864 CAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAA 415805 Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC 21651 || | || || |||||||| || ||||| |||| |||| ||||| | ||| | ||| Sbjct 415804 AAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATC 415745 Query 21652 CAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGC 21711 |||||| | ||||||| ||||||||||| || ||| || ||||| || Sbjct 415744 ACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGC 415685 Query 21712 TTTTAA-AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTAT 21770 || || |||| | | | ||| | ||| | ||| || Sbjct 415684 ATTCAACAAGAAG-TCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAAT 415626 Query 21771 ACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTG 21830 | |||| || || || ||||| ||| || || || ||||| ||||| | || |||| Sbjct 415625 AAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTG 415566 Query 21831 AACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGG 21890 | ||| ||||| | | | || || |||||||||| || || || ||||| | Sbjct 415565 GAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAG 415506 Query 21891 CGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TTT 21946 | ||||| || || | | | || ||| ||| ||||| || ||| || || Sbjct 415505 CAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTC-GTTCATTCTGTTG 415447 Query 21947 TTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 ||||| || | ||| || || ||||| | |||||||| |||||||| Sbjct 415446 TTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAA 415397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900740161160