Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq7 140 8e-28 seq1 100 7e-16 >seq7 Length=940253 Score = 140 bits (154), Expect = 8e-28 Identities = 1122/1777 (63%), Gaps = 80/1777 (5%) Strand=Plus/Minus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||| ||| | ||| |||||| || || || ||| | ||| | || ||| | |||||| Sbjct 342095 ATCAACGGTAAGGTTGCTGAACGTCCTCAACACATGATCATGAGAGTGGCTGTCGGTATC 342036 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-TT 363548 || | ||| |||| | | ||||| || || || | | || || || Sbjct 342035 CACGGTAGAGATATTGAAAAGGTTTTGGAAACTTACAACCTAATGTCT-CTAAGATACTT 341977 Query 363549 CACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTG 363608 ||| ||||| |||||||| | | ||||||||| |||| | ||||||| ||||| || || Sbjct 341976 CACACACGCTTCGCCAACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATCATG 341917 Query 363609 CTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTG 363668 || || | |||||||| |||||||| || ||||| | ||||| | ||| | || Sbjct 341916 TTTCCTAGTGGCCATGAAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGAATG 341857 Query 363669 TGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-AC 363727 ||| | || || |||| || || || |||||| | || ||||| ||||| | || Sbjct 341856 TGCCATGATCTCTAAGACCGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCTAC 341797 Query 363728 AGAACAGTTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGT 363786 | ||||||| || || || |||| | || || | |||| ||| ||||| Sbjct 341796 CGGTTC-TTACATTGCTGGTACTAACGG-TACTTCTAACGGTATTATTCCAATGATTCGT 341739 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 || || |||| ||||| | ||||| ||||| ||||| ||| | || || || Sbjct 341738 GTTTTCAACAACACTGCTCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTC 341679 Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906 || |||| ||||||| || | ||||| || || || | || || | || ||| Sbjct 341678 GCCTTGTACATCGAGCCATGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGAAC 341619 Query 363907 ACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCAT 363966 || || || ||| | |||||| | || ||||| ||||| ||| | | || | | Sbjct 341618 CACGGTAAGGAAGAAATCCGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATCTT 341559 Query 363967 TTTATGAAGCGCGTGGAGGCAGGTAAGAA--TTGGTCACTCTTTTGCCCACACGAATGTC 364024 || |||||| | || ||| | | | ||| |||| | | || | ||| ||||| | Sbjct 341558 TTCATGAAGAGAGTCGAG--AAGAACGAAGATTGGACTTTGTTCTCTCCAAACGAAGCAC 341501 Query 364025 CAGGTCTTTCC-GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCG 364083 |||| ||| || ||||| | ||||| || | || || | |||||| || || Sbjct 341500 CAGG-CTTACCAGATGTTTACGGTGATGAATTTGAAGCATTGTACGAACGTTACGA---- 341446 Query 364084 GAGGGAAAGGC----TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139 ||| ||| | | | | ||||| | || || ||| | |||| || ||| |||| Sbjct 341445 GAGAGAAGGCCGTGGTAGAAAGACTGTCAAGGCTCAAAAGTTGTGGTACGCTATCTTGGA 341386 Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199 | || | || || || || || | ||| | ||||| ||| | || ||| ||| Sbjct 341385 AGCTCAAACCGAAACTGGTACCCCATTCATGCTATACAAGGATGCTTGTAACAAGAAGAG 341326 Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATA 364259 || || || || | ||||| || || ||| | ||| || || ||||||| Sbjct 341325 TAATCAAAAGAACTTGGGTACTATCAAGTCTTCGAACTTGTGTTGTGAAATCGTTGAATA 341266 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGT---T 364316 | | || || || || || || |||||| | || || ||||| | || |||| | Sbjct 341265 CTCTAACCCAGAAGAAACCGCTGTTTGTAACTTGGCTTCTATCGCTTTGCCAGCGTTCAT 341206 Query 364317 TGTAAAA------GATGGTACTTTTGACCACCAGCATCTTTATGACGTAACC---TATC- 364366 || || | ||||||| | | ||| || ||| | || || | |||| Sbjct 341205 TGAAATATCAAACGATGGTAAGACTCAA-ACCTACAACTTCAAGAAGTTGCACGATATCT 341147 Query 364367 ---ATGCT---ACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTG 364420 | | | ||| |||| | ||| | || ||| || ||||||||| || | Sbjct 341146 CTAAGGTTTTGACTCGCAACTTGAACAGAATCATTGACCGTAACTATTATCCAGTT---G 341090 Query 364421 AAGCCG--AGC-GTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCG 364477 || | | || | || || ||| | ||| | || |||| | ||||| || || | | Sbjct 341089 AAACTGCTAGAAGATCAAACATGAGACATAGACCTATTGCATTGGGTGTTCAAGGTTTAG 341030 Query 364478 CTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTC-GTGTTCTAAAT 364536 | |||| ||| |||||||| || ||||||| || || || | | | | || Sbjct 341029 CCGACGCTTTCATGATGCTACGTTTGCCATTTGACTCTGAAGAAGCAAAGAGAT-TGAAC 340971 Query 364537 AAGGAGATCTTTGAAACAATGTATTTTGCCGCAA-TGACTGCTTCGTGTGATTTGGCAAA 364595 | ||||||||||| || || || || ||| || | || || |||||||| Sbjct 340970 GTCCAAATCTTTGAAACTATCTACCATGGTGCTTGTGAAGCCTCCATG-GAATTGGCAAA 340912 Query 364596 A-ACCAAGGG--AAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCA 364652 | |||| | | | ||| || ||| || || || | || || || || Sbjct 340911 GGAAGAAGGTCCATATGAATCT--TTCCCAGGC-TCTCCAGCATCTGAAGGTAAGTTACA 340855 Query 364653 GTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT--ACGTTCC 364710 || ||||||||| | || ||| || || |||| | ||||||| | | | | Sbjct 340854 ATTCGATCTATGGGGTAAGACCCCAACTAACCTATGGGAATGGGATAACTTGAAGGCTGA 340795 Query 364711 AACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACA-GCGCCCATGCCCACGGCTTC 364769 || | ||| | || ||| | ||||| | ||| | || || ||||| || ||||| Sbjct 340794 AA--TCAAGCAACACGGTCTAAGAAACTCTTT-GTTGCTCGCTCCAATGCCAACCGCTTC 340738 Query 364770 TACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTC 364829 || | || ||| | || |||||||||| ||||| || | || ||| | || || Sbjct 340737 CACATCCCAAATCTTGGGTTACAACGAGTGTTTCGAGCCATACACTTCCAACATGTACTC 340678 Query 364830 ACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTC 364889 || || || | || || ||||| | | || || ||| | | ||| | Sbjct 340677 TCGTCGTGTGTTATCTGGTGAATTCCAAATCGTCAACCCTTACTTGCTACGTGATTTGGT 340618 Query 364890 CGACCGCGGGCTGTGGGGTGACAGC-ATGAAGAACTATATCATCGCCGCTAATGGTTCTG 364948 || || | |||| ||| ||| |||||| | |||||||||| | |||||||||| Sbjct 340617 TGATTTGGGTATTTGGGATGA-AGCTATGAAGTCCCATATCATCGCTGATAATGGTTCTA 340559 Query 364949 TGCAGAACATTCCAGGATTTCCAGAAGATCTGAA-GCCTATTTACAAAACCGTATGGGAA 365007 | || ||| | ||| | ||| |||| || || | || | ||||| || || |||||| Sbjct 340558 TCCAAAACTTGCCAAACATCCCACAAGAGCTAAAAGACT-TATACAAGACTGTTTGGGAA 340500 Query 365008 ATTTCCATGCGAACTCTCATT---GATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAG 365064 || || || || | |||| |||||||| || || || | ||||| |||| ||| Sbjct 340499 ATATC---GCAAAAGCACATTATCGATATGGCCGCTGACCGTGCTGCTTATATCGATCAA 340443 Query 365065 AGCCAGTCGTTTAACGT----ATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCAT 365120 ||| ||||| ||| | |||| || | ||||| | ||| | || ||||| Sbjct 340442 TCCCAATCGTTGAACATTCACATTCGTGCC----CCAACTATGGGTAAGTTGACTTCCAT 340387 Query 365121 GCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157 |||||||||||| ||||| ||| | ||||| ||| Sbjct 340386 GCATTTCTACGGATGGAAGAAGGGTTTGAAGACTGGT 340350 >seq1 Length=1722779 Score = 100 bits (110), Expect = 7e-16 Identities = 269/404 (67%), Gaps = 12/404 (3%) Strand=Plus/Plus Query 111315 TTTCCACTTCTCACAACAAAGCGAACATATTGG--AAGGGAATTGTCGAAGAACTTCTGT 111372 ||||||||||| || || ||| || | || ||||| ||| | || ||| | | Sbjct 858365 TTTCCACTTCTAACTACCAAG--AAAGTTTTCACCAAGGGTATTATTCTTGAGCTTTTAT 858422 Query 111373 GGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGG 111432 |||||||| || |||| ||| || |||| | | || ||| || || |||| Sbjct 858423 GGTTTATTTCTGGCTGTACTGATGGTAAGAAACTCTCTGATCAAGGTGTGAAGATCTGGG 858482 Query 111433 ATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACA-ACGAAGAAGGT 111491 | || || ||||| ||||| | | || || | || ||| || | ||| || ||| Sbjct 858483 AAGGGAACGGATCCCGTGAGTACTTGGACTCCTTGGGACTTACAGATAGACGT-GAGGGT 858541 Query 111492 GATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATG 111551 ||| | ||||||||||| || || |||||| | || || || ||||| ||||| || ||| Sbjct 858542 GATTTGGGACCAGTTTATGGGTTCCAATGGAGACATTTCGGAGCAGAATACAAGAC-ATG 858600 Query 111552 CACGACTCATATGATTC---ACAGGGAACTGATCAATTACAGAATGTCATTGATCAAATT 111608 ||| || |||| ||| || |||||| ||| |||| ||| || | | Sbjct 858601 T--GACGATGATTATTCGGGACAAGGTGTTGATCAGTTAAGCGATGTGATTCATAAGTTG 858658 Query 111609 AAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGAA 111668 |||||||| || | | | ||||||||| ||||||||||| || || | Sbjct 858659 AAGAACAATCCTTACGATAGAAGGATTATTATGTCAGCATGGAACCCTCCTGATTTCCCA 858718 Query 111669 AAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712 |||||||| ||||||||||| ||| | | | ||||| ||||| Sbjct 858719 AAAATGGCTCTTCCACCATGCCATGTGTTCTCTCAGTTCTATGT 858762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353449707038