Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq5 116 3e-21
seq2 113 4e-20
seq3 102 7e-17
>seq5
Length=1351988
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || ||||||| || | |||||| | |||||||| | |
Sbjct 1201012 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 1201071
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| || | ||||| ||||| ||||| ||||| || ||||| || |||
Sbjct 1201072 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1201131
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||| | | || |||||| | ||||||| |||| | || || |||
Sbjct 1201132 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 1201191
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| |||||||| |||| || || || ||||||||||| ||
Sbjct 1201192 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 1201238
>seq2
Length=1688883
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || || || || || | || || | |||||||| |
Sbjct 908212 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 908271
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | || ||| |||||| ||||| ||||| || ||||| || |||
Sbjct 908272 GACACTATTGACAATGTGAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 908331
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||||| | || || ||| | ||||| | |||| | ||| || |||
Sbjct 908332 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 908391
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| ||||||||| |||| ||||| || ||||||||||| ||
Sbjct 908392 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 908438
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047
||||||||| | ||||| || || ||||| || || | || || | ||||| || |
Sbjct 907753 AAAATGCAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAAGTTGAATCT 907812
Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107
||||| || || | || || ||||| || || ||||| || ||||| ||
Sbjct 907813 TCTGACACTATTGACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTATTCCTCCAGAC 907872
Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167
||||| ||| |||||| | || || ||| | ||||| | |||| | || ||
Sbjct 907873 CAACAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCTGACTAC 907932
Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||||||||| ||||||||| |||| ||||| || ||||||||||| ||
Sbjct 907933 AACATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 907982
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || || || || || | || || | |||||||| |
Sbjct 907984 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 908043
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | || || |||||| ||||| ||||| || ||||| || |||
Sbjct 908044 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 908103
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||||| | || || ||| | ||||| | |||| | || || |||
Sbjct 908104 CAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCTGACTACAAC 908163
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| ||||||||| |||| ||||| || ||||||||||| ||
Sbjct 908164 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 908210
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || || || || || | || || | |||||||| |
Sbjct 908440 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 908499
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | || || |||||| || |||||||| || ||||| || |||
Sbjct 908500 GACACTATTGATAATGTGAAGTCTAAGATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 908559
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||||| | || || ||| | ||||| | |||| | ||| || |||
Sbjct 908560 CAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 908619
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| ||||| ||| | || || || || || |||||||||||
Sbjct 908620 ATCCAAAAGGAATCCACACTCCACTTGGTCTTGAGGTTGAGAGGAGG 908666
>seq3
Length=1564943
Score = 102 bits (112), Expect = 7e-17
Identities = 377/575 (66%), Gaps = 33/575 (6%)
Strand=Plus/Minus
Query 104602 ACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAA 104661
|||| ||||| || ||||| || || || ||| ||||| || | |||||| |||||
Sbjct 416196 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 416137
Query 104662 GGATTCAAAGTC-TTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCAC 104720
|| || | | | || | ||||| | || || | | | || |||| || || ||
Sbjct 416136 GGGTT-AGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAAC 416078
Query 104721 AAATTCGATGTACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAAGC 104780
|||||||| ||| | | ||| ||| || ||||| |||| | | ||||||| |||
Sbjct 416077 AAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGC 416018
Query 104781 GTTAGTaaaaaaa-TCTTTCTCGATGTCCACGGCTTCCTTAAACATG--TTCAGCAC-CT 104836
|| | || | ||||| ||||| || || ||||| | | || ||| || ||
Sbjct 416017 GTCGATGAAGTATCTCTTT-TCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAATCT 415959
Query 104837 TGCTTTCAGAAAGCTTGTCCTCTTTGGCAATATATTTGTTGTAATAG-AGGCAGGCAAAG 104895
| || | |||||| |||| ||| || || ||||| | |||||||||
Sbjct 415958 TTGGATCTG---GCTTGT--TCTT---CAAA-----TGATGGAATAGCAAACAGGCAAAG 415912
Query 104896 TCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAAGCCAGGTA-G 104954
|| |||||||| ||||||||||| |||| | |||||| | | ||||| || || |
Sbjct 415911 TCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATC 415852
Query 104955 AGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAGAAAAAGAC 105014
| ||||| | |||| || || |||||||||| || ||| |||||||| ||
Sbjct 415851 AAACCCTTCT------TCTTCAA-CCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACAC 415799
Query 105015 ACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAATGTAGCAGTTTGACTT--TCA 105072
|||||| ||| || ||||| |||| | ||| ||| | ||| || | | | |
Sbjct 415798 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCG--TATAGGGCTTCGTCATCACGA 415741
Query 105073 ATCCATTTCTGAGCCCATGTTGCCTTCCGTTTGACGCTATCAATGTGCTCGATGGCATTC 105132
|||||| | |||||| ||||| ||||| |||| || |||||||||
Sbjct 415740 ATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTC 415681
Query 105133 AAAATCCTGTCGCATTCCTGAGGATCTTTAATGTA 105167
|| | |||| ||||| |||||| || |||||
Sbjct 415680 AACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTA 415646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935952841395
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |