Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq2 114 1e-20 seq5 89.7 4e-13 >seq2 Length=1688883 Score = 114 bits (126), Expect = 1e-20 Identities = 171/240 (71%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 115274 AAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAA 115333 |||| ||||||||||||||| |||||||| ||| | || || || ||||| || | ||| Sbjct 907744 AAGACATTAAAAATGCAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAA 907803 Query 115334 ACGGAGTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGT 115392 || || |||||| ||| |||| || || || || ||||| ||||| | Sbjct 907804 GTTGAATCTTCTGACACTATTG-ACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTAT 907862 Query 115393 CCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCAT 115452 || || || |||||| | |||| |||||| |||||||||||||| | | ||| | Sbjct 907863 TCCTCCAGACCAACAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCT 907922 Query 115453 GGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 | || || ||||||||||| || ||||| | || | || ||||||||| |||| || Sbjct 907923 ATCTGACTACAACATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 907982 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || ||||| || | || || || || || || | ||| || || Sbjct 908212 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 908271 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || ||| || ||| || || ||||| | || || || Sbjct 908272 GACACTATTG-ACAATGTGAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCA 908330 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| ||| || |||||||||||||| | | ||| | |||| || || Sbjct 908331 ACAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAA 908390 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||| || ||||| | || | || ||||||||| |||| || Sbjct 908391 CATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 908438 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || ||||| || | || || || || || || | ||| || || Sbjct 908440 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 908499 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| ||| | || || || ||| ||||||||||| | || || || Sbjct 908500 GACACTATTGATAATGTGAAGTCTAAGATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 908559 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 |||||| | |||| |||||| |||||||||||||| | | ||| | |||| || ||| Sbjct 908560 CAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 908619 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || ||||| || || || | || |||| ||||| ||| ||||||| Sbjct 908620 ATCCAAAAGGAATCCACACTCCACTTGGTCTTGAGGTTGAGAGGAGG 908666 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || ||||| || | || || || || || || | ||| || || Sbjct 907984 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 908043 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || || || ||| || || ||||| | || || || Sbjct 908044 GACACTATTG-ACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCA 908102 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| |||||| |||||||||||||| | | ||| | | || || || Sbjct 908103 ACAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCTGACTACAA 908162 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||| || ||||| | || | || ||||||||| |||| || Sbjct 908163 CATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 908210 >seq5 Length=1351988 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| ||||| || || || || || || |||||| | ||| || || | Sbjct 1201012 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 1201071 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || || || || || || ||||| | || || || Sbjct 1201072 GACACCATT-GACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCA 1201130 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | || | ||| || || ||||| ||||||| | ||| || | || || || Sbjct 1201131 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAA 1201190 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || ||||| | || |||| ||||||||| |||| || Sbjct 1201191 CATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 1201238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343953345080