Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq7 268 1e-66
seq5 161 1e-34
>seq7
Length=940253
Score = 268 bits (296), Expect = 1e-66
Identities = 749/1139 (66%), Gaps = 14/1139 (1%)
Strand=Plus/Plus
Query 62823 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 62882
||||||| || || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 341297 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 341356
Query 62883 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 62942
||||||| ||||||||||| | |||| ||| | || || | ||| | | ||||||
Sbjct 341357 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 341416
Query 62943 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63000
| | | ||| || | | |||||| ||||| || |||||| ||| || ||
Sbjct 341417 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 341474
Query 63001 GTCTCCCCAAACAT-TGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63059
|| || |||||| || || || || ||| | ||| | | ||| | ||| |||
Sbjct 341475 ATCACCGTAAACATCTGGTAAG-CCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTT 341533
Query 63060 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63119
||| | || |||| ||||| || ||||| || ||||| || ||| || | ||||
Sbjct 341534 CGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTC 341593
Query 63120 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 63179
| | | ||| || || || |||||| | | |||| ||| | | ||||| |
Sbjct 341594 TTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTG 341653
Query 63180 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63239
| ||||| || || | ||| | ||| | | ||||| | ||||| || || || || |
Sbjct 341654 AGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAA 341713
Query 63240 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCAT 63299
||| | ||| ||||| || |||| | | ||||||||||||||| || || ||||| |
Sbjct 341714 CGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGT 341773
Query 63300 TGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCC 63359
| || || | || || || | | |||||| || ||| | ||| || || |
Sbjct 341774 TAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCAC 341833
Query 63360 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 63419
| || | |||||||| | || ||| || || || || || || || || || ||
Sbjct 341834 CAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAAT 341893
Query 63420 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 63479
| ||| ||||| | ||| ||||| |||||||| || || ||| || ||||| |
Sbjct 341894 CTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGA 341953
Query 63480 ATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63539
| | || || |||||||| || || || || ||| | ||| ||||| || || | |
Sbjct 341954 AAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAA 342013
Query 63540 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63599
| || ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 342014 CCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGAC 342073
Query 63600 TTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63659
|||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| |
Sbjct 342074 GTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGA 342133
Query 63660 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATT 63719
| |||||| || || |||| ||||| | ||| | ||||| | |||| || | |
Sbjct 342134 AGTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCT 342193
Query 63720 TGTTAACTA---CATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAG 63776
| || | ||| || | || | ||||| ||||| | || | ||| | || |
Sbjct 342194 CCATGACGATGTCATACA-CCTCATCC--GAAATCATAGGCGAGTGAATACCAGTCTTTG 342250
Query 63777 GATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGT 63836
| ||||| | || | || || || | ||||| ||| | || | |||| ||||
Sbjct 342251 GGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGT 342310
Query 63837 GTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTAC 63896
| | || || | ||| ||||||||||| | | | || ||||| || || || || |
Sbjct 342311 GCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-C 342369
Query 63897 AAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATA 63954
| || ||| | |||| || |||| | || ||||| || || |||||||| | |||
Sbjct 342370 ATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 342428
>seq5
Length=1351988
Score = 161 bits (178), Expect = 1e-34
Identities = 209/287 (73%), Gaps = 4/287 (1%)
Strand=Plus/Minus
Query 63031 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63090
|||||| |||| | | ||||| ||| | | || | || |||| |||||| |||||
Sbjct 97103 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 97044
Query 63091 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 63150
|||||||| ||||| ||||| |||| || || ||| || ||||| ||||||
Sbjct 97043 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 96984
Query 63151 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA- 63209
| | || | | ||| | |||||||| |||||| |||||||||||||| || ||
Sbjct 96983 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATA--CAAAAG 96926
Query 63210 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63268
| ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | |
Sbjct 96925 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGC 96866
Query 63269 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATA 63315
| ||| |||| | |||||| || |||||||| | ||||||||||||
Sbjct 96865 AGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATA 96819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631928716400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |