Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq7 268 1e-66 seq5 161 1e-34 >seq7 Length=940253 Score = 268 bits (296), Expect = 1e-66 Identities = 749/1139 (66%), Gaps = 14/1139 (1%) Strand=Plus/Plus Query 62823 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 62882 ||||||| || || || || | |||||||||||| |||||||| |||||||| || || | Sbjct 341297 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 341356 Query 62883 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 62942 ||||||| ||||||||||| | |||| ||| | || || | ||| | | |||||| Sbjct 341357 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 341416 Query 62943 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63000 | | | ||| || | | |||||| ||||| || |||||| ||| || || Sbjct 341417 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 341474 Query 63001 GTCTCCCCAAACAT-TGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63059 || || |||||| || || || || ||| | ||| | | ||| | ||| ||| Sbjct 341475 ATCACCGTAAACATCTGGTAAG-CCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTT 341533 Query 63060 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63119 ||| | || |||| ||||| || ||||| || ||||| || ||| || | |||| Sbjct 341534 CGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTC 341593 Query 63120 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 63179 | | | ||| || || || |||||| | | |||| ||| | | ||||| | Sbjct 341594 TTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTG 341653 Query 63180 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63239 | ||||| || || | ||| | ||| | | ||||| | ||||| || || || || | Sbjct 341654 AGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAA 341713 Query 63240 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCAT 63299 ||| | ||| ||||| || |||| | | ||||||||||||||| || || ||||| | Sbjct 341714 CGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGT 341773 Query 63300 TGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCC 63359 | || || | || || || | | |||||| || ||| | ||| || || | Sbjct 341774 TAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCAC 341833 Query 63360 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 63419 | || | |||||||| | || ||| || || || || || || || || || || Sbjct 341834 CAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAAT 341893 Query 63420 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 63479 | ||| ||||| | ||| ||||| |||||||| || || ||| || ||||| | Sbjct 341894 CTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGA 341953 Query 63480 ATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63539 | | || || |||||||| || || || || ||| | ||| ||||| || || | | Sbjct 341954 AAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAA 342013 Query 63540 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63599 | || ||||| | || || || || || || | ||| | |||||| ||||| | Sbjct 342014 CCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGAC 342073 Query 63600 TTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63659 |||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| | Sbjct 342074 GTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGA 342133 Query 63660 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATT 63719 | |||||| || || |||| ||||| | ||| | ||||| | |||| || | | Sbjct 342134 AGTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCT 342193 Query 63720 TGTTAACTA---CATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAG 63776 | || | ||| || | || | ||||| ||||| | || | ||| | || | Sbjct 342194 CCATGACGATGTCATACA-CCTCATCC--GAAATCATAGGCGAGTGAATACCAGTCTTTG 342250 Query 63777 GATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGT 63836 | ||||| | || | || || || | ||||| ||| | || | |||| |||| Sbjct 342251 GGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGT 342310 Query 63837 GTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTAC 63896 | | || || | ||| ||||||||||| | | | || ||||| || || || || | Sbjct 342311 GCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-C 342369 Query 63897 AAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATA 63954 | || ||| | |||| || |||| | || ||||| || || |||||||| | ||| Sbjct 342370 ATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 342428 >seq5 Length=1351988 Score = 161 bits (178), Expect = 1e-34 Identities = 209/287 (73%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 63031 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63090 |||||| |||| | | ||||| ||| | | || | || |||| |||||| ||||| Sbjct 97103 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 97044 Query 63091 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 63150 |||||||| ||||| ||||| |||| || || ||| || ||||| |||||| Sbjct 97043 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 96984 Query 63151 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA- 63209 | | || | | ||| | |||||||| |||||| |||||||||||||| || || Sbjct 96983 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATA--CAAAAG 96926 Query 63210 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63268 | ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | | Sbjct 96925 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGC 96866 Query 63269 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATA 63315 | ||| |||| | |||||| || |||||||| | |||||||||||| Sbjct 96865 AGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATA 96819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631928716400