Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2 143 2e-29 >seq2 Length=1688883 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| ||||| | ||||| | ||||| || || ||| Sbjct 908440 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 908499 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || ||||| | || | ||| || |||||||| ||||| || ||||| Sbjct 908500 GACACTATTGATAATGTGAAGTCTAAGATTCA-AGATAAAGAAGGTATTCCTCCAGACCA 908558 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | |||||||| || |||||||||||||| | | ||| | ||| ||||| Sbjct 908559 ACAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAA 908618 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| |||||||| || || || || | ||| | |||||||| Sbjct 908619 CATCCAAAAGGAATCCACACTCCACTTGGTCTTGAGGTTGAGAGGAGG 908666 Score = 136 bits (150), Expect = 3e-27 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| ||||| | ||||| | ||||| || || ||| Sbjct 908212 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 908271 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || || || || | || | ||| ||||| ||||| ||||| || ||| Sbjct 908272 GACACTATTGA--CAATGTGAAATCTAAGATTCAA-GACAAGGAAGGTATTCCTCCAGAC 908328 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | |||||||| || |||||||||||||| | | ||| | ||| ||| Sbjct 908329 CAACAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTAC 908388 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||| ||||| || || || ||||| | || | ||||| || Sbjct 908389 AACATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 908438 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| ||||| | ||||| | ||||| || || ||| Sbjct 907984 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 908043 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || ||||| | || | ||| ||||| ||||| ||||| || ||||| Sbjct 908044 GACACTATTGACAATGTGAAGTCTAAGATTCA-AGACAAGGAAGGTATTCCTCCAGACCA 908102 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | |||||||| || |||||||||||||| | | ||| | || ||||| Sbjct 908103 ACAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCTGACTACAA 908162 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| ||||| || || || ||||| | || | ||||| || Sbjct 908163 CATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 908210 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 || ||||||||| ||||| ||||| || || ||||| ||||||| | ||||| || || Sbjct 907752 AAAAATGCAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAAGTTGAATC 907811 Query 25055 GTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||||| || ||||| || ||| || || ||||| ||||| || || Sbjct 907812 TTCTGACACTATTGACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTATTCCTCCAGA 907871 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| | | |||||||| || |||||||||||||| | | ||| | || || Sbjct 907872 CCAACAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCTGACTA 907931 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| |||||||| ||||| || || || ||||| | || | ||||| || Sbjct 907932 CAACATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 907982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327952469335