Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 206 3e-48 >seq3 Length=1564943 Score = 206 bits (228), Expect = 3e-48 Identities = 599/907 (66%), Gaps = 29/907 (3%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| |||||| |||||||| || ||| | ||||| |||||||| || || || | Sbjct 416224 CATGACACCAGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGC 416165 Query 92850 CAAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903 ||| || || | ||| || || || ||| || || |||| || || ||| | || Sbjct 416164 CAAGGAAAT-GTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTAC 416106 Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961 | | |||| || || ||| || || |||||||| | ||| || ||||||||| Sbjct 416105 CTAAAGCAAC-----CAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATC 416051 Query 92962 ACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTA 93020 | ||||| || | ||| || |||||||||||| | ||| | ||||| ||||| Sbjct 416050 AGCGTTCATACCCAATAGAGAAACGGGTAGAGCGTCGATGAAGTATCTCTTT-TCGATCT 415992 Query 93021 CAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTT-TTGTACGACA 93076 |||| |||||| | | |||| | || | | ||||| ||| || || | | | | Sbjct 415991 CAACAGCTTCTGTGATGATTCTTTCGAC---AATCTTTGGATCTGGCTTGTTCTTCAA-A 415936 Query 93077 TAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136 | || | | | || || ||||||||||| || |||||||| |||| | ||||| || Sbjct 415935 TGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCG 415876 Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196 || ||| || |||||||| | || || ||||| | ||| || || | ||| || Sbjct 415875 TTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAG 415816 Query 93197 CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTT 93256 |||||| ||||| | |||||||||||| || || || || | | ||| || | Sbjct 415815 GAACCAGAGAAAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGG 415756 Query 93257 GCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316 || | | | |||||| | | ||||| | || |||| || || || | Sbjct 415755 GCTTCGTCATCACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATG 415696 Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376 ||||| || || || || | | | || | || | | ||| ||||| || || || Sbjct 415695 GTTTCAATGGCATTCAACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATC 415636 Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436 |||| ||||| |||| || |||| || ||||| ||||||||| ||||||||||| Sbjct 415635 AACAACGAATAAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACAC 415576 Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496 | ||||| | || ||||| || ||| || | || || | ||||| || || ||| Sbjct 415575 TTGGCTTCTGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATA 415516 Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATA-TATGCTTTATAAAATGTTTCTCATCATCTTT 93555 |||||||| || ||||| || || | | | || || ||| | |||| | || || Sbjct 415515 CCATCGGAAGCAGCAAAGAACGCAAGCACTCTG-GAGATGAAAAATCTCTCGTTCTCGTT 415457 Query 93556 AA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612 | || | ||| || ||||| || || | ||||| |||||| |||||||||| Sbjct 415456 CATTCTGTTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAA 415397 Query 93613 CGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGAC 93672 || || || ||| | || || ||||| || || || || | ||||| || | || Sbjct 415396 AGAGGCCTCGGCTCTCTTATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCAC 415337 Query 93673 AAAACGA 93679 ||||||| Sbjct 415336 AAAACGA 415330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860737353160