Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq2 102 7e-17
seq5 89.7 4e-13
>seq2
Length=1688883
Score = 102 bits (112), Expect = 7e-17
Identities = 166/239 (69%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 111175 AAGAGTTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAA 111234
|||| |||||||||||||| |||||||| ||| | || || || ||||| || |||||
Sbjct 907744 AAGACATTAAAAATGCAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAA 907803
Query 111235 ACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTT 111294
||| | || || ||| | | || || || || || || ||||| ||
Sbjct 907804 GTTGAATCTTCTGACACTATTGACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTATT 907863
Query 111295 CCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATG 111354
|| || |||||||| | |||| |||||| |||||||| ||||| | |||| |
Sbjct 907864 CCTCCAGACCAACAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTA 907923
Query 111355 GCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
| || || || || ||||| ||||||||||| || ||||| ||| | || | |||||
Sbjct 907924 TCTGACTACAACATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 907982
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
|||||||| || ||||| || |||| || || || || || ||||| ||| |
Sbjct 908212 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 908271
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| || ||| | | || ||| || ||| ||||| ||||| |||| || |||
Sbjct 908272 GACACTATTGACAATGTGAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 908331
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||||| | |||| ||| || |||||||| ||||| | |||| | |||| || ||
Sbjct 908332 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 908391
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| ||||| ||||||||||| || ||||| ||| | || | |||||
Sbjct 908392 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 908438
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
|||||||| || ||||| || |||| || || || || || ||||| ||| |
Sbjct 907984 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 908043
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| || ||| | | || || || ||| ||||| ||||| |||| || |||
Sbjct 908044 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 908103
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||||| | |||| |||||| |||||||| ||||| | |||| | | || || ||
Sbjct 908104 CAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCTGACTACAAC 908163
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| ||||| ||||||||||| || ||||| ||| | || | |||||
Sbjct 908164 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 908210
>seq5
Length=1351988
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||||||||| ||||| || | || || || || |||||| ||||| ||| | |
Sbjct 1201012 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 1201071
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| | ||| | | || || || || ||||| ||||| |||| || |||
Sbjct 1201072 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1201131
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||||| | || | ||| || || |||||||||||| || |||| || | || || ||
Sbjct 1201132 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 1201191
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| ||||| |||||||| || || || || ||| | || | |||||
Sbjct 1201192 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 1201238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423039953597800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |