Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq2 123 6e-23
>seq2
Length=1688883
Score = 123 bits (136), Expect = 6e-23
Identities = 145/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||||| || || | |||||||||||||||||| || || ||
Sbjct 908631 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 908572
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|||| | ||||| ||||| || ||||||||||| || || || | |||||
Sbjct 908571 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCTTTATCTTGAATCTTAGACTTCAC 908515
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || |||| || ||||| ||||| | ||||| ||||| || |||| ||||||
Sbjct 908514 ATTATCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTT 908455
Query 288459 GACGAATATCTGCAT 288473
|||||| || |||||
Sbjct 908454 GACGAAGATTTGCAT 908440
Score = 114 bits (126), Expect = 3e-20
Identities = 143/195 (73%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| || || ||||||| || || | |||||||||||||||||| || || ||
Sbjct 908403 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAA 908344
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|||| | ||||| ||||| || ||||| || || || || || | ||||||
Sbjct 908343 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGATTTCAC 908287
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || |||| || ||||| ||||| | ||||| ||||| || |||| ||||||
Sbjct 908286 ATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTT 908227
Query 288459 GACGAATATCTGCAT 288473
|||||| || |||||
Sbjct 908226 GACGAAGATTTGCAT 908212
Score = 105 bits (116), Expect = 2e-17
Identities = 141/195 (72%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| || || ||||| | || || | |||||||||||||||||| || || ||
Sbjct 908175 TTCCTTTTGAATGTTGTAGTCAGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 908116
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|||| | ||||| ||||| || ||||| || || || || || | |||||
Sbjct 908115 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCAC 908059
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || |||| || ||||| ||||| | ||||| ||||| || |||| ||||||
Sbjct 908058 ATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTT 907999
Query 288459 GACGAATATCTGCAT 288473
|||||| || |||||
Sbjct 907998 GACGAAGATTTGCAT 907984
Score = 102 bits (112), Expect = 2e-16
Identities = 141/196 (72%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| || || ||||| | || || | |||||||||||||||||| || || ||
Sbjct 907947 TTCCTTTTGAATGTTGTAGTCAGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 907888
Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|||| | ||||| ||| || || ||||| ||||| ||||| || | |||||
Sbjct 907887 AATCAATCTTTGTTG---GTCTGGAGGAATACCTTCCTTATCTTGGATCTTAGACTTCAC 907831
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || |||| || ||||| ||||| | ||||| ||||| || || | |||||
Sbjct 907830 ATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCTGTTAACGTCTT 907771
Query 288459 GACGAATATCTGCATT 288474
||| || || ||||||
Sbjct 907770 GACAAAGATTTGCATT 907755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654263971102
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |