Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2 123 6e-23 >seq2 Length=1688883 Score = 123 bits (136), Expect = 6e-23 Identities = 145/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| || || | |||||||||||||||||| || || || Sbjct 908631 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 908572 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||||| ||||| || ||||||||||| || || || | ||||| Sbjct 908571 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCTTTATCTTGAATCTTAGACTTCAC 908515 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || ||||| ||||| | ||||| ||||| || |||| |||||| Sbjct 908514 ATTATCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTT 908455 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 908454 GACGAAGATTTGCAT 908440 Score = 114 bits (126), Expect = 3e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || || ||||||| || || | |||||||||||||||||| || || || Sbjct 908403 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAA 908344 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||||| ||||| || ||||| || || || || || | |||||| Sbjct 908343 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGATTTCAC 908287 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || ||||| ||||| | ||||| ||||| || |||| |||||| Sbjct 908286 ATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTT 908227 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 908226 GACGAAGATTTGCAT 908212 Score = 105 bits (116), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || || ||||| | || || | |||||||||||||||||| || || || Sbjct 908175 TTCCTTTTGAATGTTGTAGTCAGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 908116 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||||| ||||| || ||||| || || || || || | ||||| Sbjct 908115 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCAC 908059 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || ||||| ||||| | ||||| ||||| || |||| |||||| Sbjct 908058 ATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTT 907999 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 907998 GACGAAGATTTGCAT 907984 Score = 102 bits (112), Expect = 2e-16 Identities = 141/196 (72%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || || ||||| | || || | |||||||||||||||||| || || || Sbjct 907947 TTCCTTTTGAATGTTGTAGTCAGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 907888 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||||| ||| || || ||||| ||||| ||||| || | ||||| Sbjct 907887 AATCAATCTTTGTTG---GTCTGGAGGAATACCTTCCTTATCTTGGATCTTAGACTTCAC 907831 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || ||||| ||||| | ||||| ||||| || || | ||||| Sbjct 907830 ATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCTGTTAACGTCTT 907771 Query 288459 GACGAATATCTGCATT 288474 ||| || || |||||| Sbjct 907770 GACAAAGATTTGCATT 907755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654263971102