Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3 149 6e-31 >seq3 Length=1564943 Score = 149 bits (164), Expect = 6e-31 Identities = 423/641 (66%), Gaps = 13/641 (2%) Strand=Plus/Minus Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935 |||||| | ||| | ||| || ||||||||| ||||| || || || ||| |||| | Sbjct 415939 CAAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAA 415880 Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995 |||||| ||| ||||| || ||||| | || || || | ||| || ||||| || Sbjct 415879 TTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGC 415820 Query 132996 GAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA 133055 ||| || || || || || || || ||||| ||||| || |||| | || || | Sbjct 415819 GAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA 415760 Query 133056 CGTGGCTTCTTTGCTGGCGA-TCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACG 133114 |||||| | | ||| |||| | | ||||||| ||||||||||||| | Sbjct 415759 TAGGGCTTCGTCA-TCACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTG 415701 Query 133115 GCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCC-GAGGAAC--GCACGTAGG 133171 | || ||||| ||||| |||||||| || | | |||| |||| | | ||| | Sbjct 415700 GAATGGTTTCAATGGCATTCAACAA---GAAGTCGTGTTCCTTAGGATCCTTGATGTAAG 415644 Query 133172 TGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGT 133231 |||| || | |||||| |||| ||||| | ||| ||||| ||||| || |||| Sbjct 415643 TGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGT 415584 Query 133232 AAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGT 133291 | || ||| || || | ||||| || || ||| || |||| ||||||| Sbjct 415583 AGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGT 415524 Query 133292 TGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGT 133351 | ||||| || ||| || || || || || ||||| ||||||| | ||||| Sbjct 415523 TCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGT 415464 Query 133352 TGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGG 133408 | ||||||| | | |||||| | |||||||||| || | || || | | Sbjct 415463 TCTCGTTCATTCTGTTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAG 415404 Query 133409 TCCAAAACGACGCCTCGGCTTTTTTGTACATACT-CCACATGTCCGAATATTGTATGGGA 133467 ||||||| || ||||||||| | || || | || ||| || || || | || || Sbjct 415403 TCCAAAAAGAGGCCTCGGCTCTCTTATA-AGCCTCCCAGATTTCGTGGTACTTGATTGGG 415345 Query 133468 AAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTC 133508 |||| |||||| || || ||| || ||||| ||||| Sbjct 415344 AAAAGCACAAAACGACGCTTGTTCTCAACCAACAATGGCTC 415304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172743730560