Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq7 235 6e-57 seq8 102 1e-16 seq3 86.0 7e-12 >seq7 Length=940253 Score = 235 bits (260), Expect = 6e-57 Identities = 1117/1758 (64%), Gaps = 50/1758 (3%) Strand=Plus/Plus Query 109411 AGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGT 109470 || || |||||||| || || | ||| ||||||| |||| | |||||| |||| | Sbjct 340339 AGGTAGTACATACCAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAAC 340398 Query 109471 TTGG--AAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATC 109528 || | ||| | || | | || | ||||| ||| || || |||||||| | Sbjct 340399 TTACCCATAGT-TGGGGCACGA-ATGTGAATGTTCAACGATTGGGATTGATCGATATAAG 340456 Query 109529 GACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGT 109588 | |||| ||||| ||||| ||||| || |||||| |||||||| |||||||||| Sbjct 340457 CAGCACGGTCAGCGGCCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGT 340516 Query 109589 ACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCAC---CAGCCT 109645 | || | || | || | || |||| | |||||| ||||| ||| |||| Sbjct 340517 ATAAGTCTTTTAGCTCTTGTGGGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGA 340576 Query 109646 TCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATC--GTCAAC 109703 | | ||| || |||||| ||| ||| | ||| | | | ||| || | | Sbjct 340577 TGAT-ATGGGA--CTTCATAGCTTCATCCCAAATACCCAAATCAACCAAATCACGT-AGC 340632 Query 109704 AAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGT 109763 ||| | |||||| | |||||||||| | || || ||| ||||| | Sbjct 340633 AAG-TAAGGGTTGACGATTTGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGA 340691 Query 109764 CGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCAT 109823 ||||| || ||||||||||| |||| || | |||||| | |||||||| || ||||| Sbjct 340692 AGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTGGAAGCGGTTGGCAT 340751 Query 109824 GGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTAC--CCGC--TCACGCATTG 109879 ||||| | | | | ||||| ||||| | ||| | | || ||| | || Sbjct 340752 TGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCCTTCAAG--TTA 340809 Query 109880 CGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTA 109939 ||||| || | | | | | |||| ||| ||| | ||| ||| | Sbjct 340810 --TCCCATTCCCATAGGTTAGT---TGGGGTCTTACC---CCATAGATCGAATTGTAACT 340861 Query 109940 CACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACT 109999 ||| |||| || ||||| || |||| || || | || || ||| ||||| | Sbjct 340862 TACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGCCAATT 340921 Query 110000 CGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGC 110059 | || || || || |||| || ||||| ||||| || || | |||| Sbjct 340922 CCATGGAGGCTTCACAAGCACCATGGTAGATAGTTTCAAAGATTTGGACGTTCAATCTCT 340981 Query 110060 GAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAA 110119 | |||||| |||| || || | || | || || | || |||| ||| |||| Sbjct 340982 TTGCTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAACCTTGAA 341041 Query 110120 CACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAA 110179 |||| | |||| || | ||| ||||||| || | || ||||||||| || || ||| Sbjct 341042 CACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACTGGATAAT 341101 Query 110180 AGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTT 110239 |||| ||||| |||| | || | || |||| | ||| | ||| || || | | Sbjct 341102 AGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCGTGCAACT 341161 Query 110240 TGTCGTAATCGAACGTTTTCGTCT--CCTTATTGACATATTTG----------GGGAGAG 110287 | | | | | | | |||| |||| || | | |||||| || | || Sbjct 341162 TCTTGAAGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGCTGGCAAAG 341221 Query 110288 CAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCG 110347 | ||||| || | || || |||| || || ||| || | |||||| | ||||| Sbjct 341222 CGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCAC 341281 Query 110348 TACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATG 110407 ||||||||| ||| ||| || |||||||||||| ||||| || ||| || | Sbjct 341282 AACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAG 341341 Query 110408 CATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCC 110467 ||||||| || |||||| |||||||||||||||| || || | | | || || | || Sbjct 341342 CATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACC 341401 Query 110468 ATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACA 110527 | | | || |||||| || | | ||||| |||||| ||||| Sbjct 341402 ACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACA 341461 Query 110528 AGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGA 110587 | | |||||||| | ||||| ||||| | | || || | || ||| |||| | Sbjct 341462 ATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACA 341521 Query 110588 GGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCG 110647 | ||||| | | || ||| || ||||||||||| || || || ||||| | || | Sbjct 341522 AAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTG 341581 Query 110648 AGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGT 110707 ||| | ||| | ||| ||||| | ||| ||||| | | || | |||| Sbjct 341582 GGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGT 341641 Query 110708 CCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGAC 110761 | | |||||| ||||||||||| |||| || | |||| || || ||| || Sbjct 341642 CGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTAC 341701 Query 110762 GACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTC 110821 ||| |||| ||| || || || ||| ||||| || | | ||| |||||||| | Sbjct 341702 CACCT---TGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATAC 341758 Query 110822 CATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATAT 110881 | | || ||| || ||||| ||| || | | |||||||| ||| || | Sbjct 341759 CGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGT 341818 Query 110882 GCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAA 110941 ||| |||||||||||| || |||| || ||||| || | | || | |||| Sbjct 341819 GCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAA 341878 Query 110942 TACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAG 111001 |||| ||||| |||||| |||| |||| | ||| || || || ||||| || ||| ||| Sbjct 341879 TACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAG 341938 Query 111002 GCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGT 111061 | || || |||||||| ||||| || | || || |||| | | | ||||| || Sbjct 341939 GAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGT 341998 Query 111062 TGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGA 111121 |||| || || | | | |||| ||||||| ||||| | || |||| ||||| Sbjct 341999 TGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGA 342058 Query 111122 ACATATATTGAGG-CGTT 111138 ||| | |||||| |||| Sbjct 342059 TCATGTGTTGAGGACGTT 342076 >seq8 Length=945852 Score = 102 bits (112), Expect = 1e-16 Identities = 313/479 (65%), Gaps = 4/479 (1%) Strand=Plus/Plus Query 167302 CGCTTGATATTCTCCTTGATATCGTCAGGGTTAAATGGGGGGATGTAGCAACTGAAACCC 167361 ||||||| ||| | ||||| |||| || ||||| || |||| | ||| |||| Sbjct 479189 CGCTTGACATTGTTGACAATATCTACAGGATTGAATGGCGGAATGTTGGTACTCCAACCA 479248 Query 167362 GTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAAAGTCG 167421 || |||||||||||| ||| || ||||||| ||| || | |||| ||| | || Sbjct 479249 GTCCCAATACCTTCACAACCATTGACCAAAATCATAGGAATTACAGGCAAGTACCATTCA 479308 Query 167422 GGTTCAATGGAACGACCATCATCATCCAAGTA-GTTGAGAATGGCATCATCTTTGGGATC 167480 ||||||| | | |||| || | | ||| ||| | ||||| ||| ||| | | Sbjct 479309 GGTTCAACTGTTTGTTCATCGTCTTGAATGTAGGTTAATAATGG-ATCGTCTAGAGAGTT 479367 Query 167481 GAAGAGCTTTCGAGCCTCCTTGGTAAGCTTCGTAAAGATGTACCTCGTCTGAGACGCATC 167540 |||| |||| || ||| |||||| || ||||| || |||| || | ||| Sbjct 479368 AAAGATTTTTCTAGTGATCTTATTAAGCTCTGTGAAGATATATCTCGGAGCAGCTGAATC 479427 Query 167541 CTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGC-TCGAGAAGATTGATGTTAT 167599 || ||||| | | ||||| || |||| ||| || | ||| | || || | Sbjct 479428 TTTACCACCAGTAGCTCTGGTACCGAAAGCACCATTAGGCTTCAACAAG-TAAATATTGT 479486 Query 167600 TCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTTTCAGCGAGGGAAACTTCGCCGT 167659 | || || | |||| | ||| || || ||||||| | |||||| |||| |||| Sbjct 479487 TAGAACCAACAAAATCTTGGGCTAAACCAACAATCGTTTGATATAGGGAAGCTTCACCGT 479546 Query 167660 GGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTCATCTT 167719 | ||||| | | | ||||| ||||| | | | || |||||||| || || || Sbjct 479547 GATGGTATCCGGTATGTTCAGAAACATAACCACCTAGTTGAGCAACCTTGATTTCTGATT 479606 Query 167720 TGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACCATCT 167778 | | ||| | | ||||| | ||| |||||||| | |||| |||||| | |||||| Sbjct 479607 TTAAATTTCTCTTAAAACAGGCATAGATAACCTTTCTTTGACCAGGTTTTAACCCATCT 479665 >seq3 Length=1564943 Score = 86.0 bits (94), Expect = 7e-12 Identities = 163/235 (69%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 ||||| ||| ||||||||||||||||| || ||||| | | || |||||||||||| Sbjct 416205 TAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATA 416146 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAG-ATTGGTGGTTGACCAACTTGTTTCAGAAGACG 119326 ||||| || || || || ||| || ||| | ||| ||| | ||| || | Sbjct 416145 AAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTT-ACCTAAAGCAACCAGTAGTCT 416087 Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386 || | ||| | |||| |||| | |||| || | |||||||| | ||| | | Sbjct 416086 GTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA-GAAA 416028 Query 119387 CGGG-AGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGAT 119440 |||| ||||| |||| || | | |||| |||||||| ||||||||| | | ||| Sbjct 416027 CGGGTAGAGCGTCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT 415973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975933740200