Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq7 161 3e-34
seq5 111 5e-19
seq6 98.7 3e-15
seq8 93.3 1e-13
>seq7
Length=940253
Score = 161 bits (178), Expect = 3e-34
Identities = 343/509 (67%), Gaps = 5/509 (1%)
Strand=Plus/Plus
Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCG 156082
|||||| | |||| || || |||| |||||| ||||| || || || || ||
Sbjct 341661 TGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACG 341720
Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142
|||||| || ||||| |||| | ||| ||||||||||| || ||||| || || || ||
Sbjct 341721 AGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACC 341780
Query 156143 GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCA 156202
||| | ||||| | || |||| || ||||| || | ||||||||||| |
Sbjct 341781 AGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGT 341840
Query 156203 TTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTC 156262
||||| || || |||||||| | ||| | | ||||||||||||| ||||| || |
Sbjct 341841 CTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTT 341900
Query 156263 CATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGT 156322
||| | | ||| | || || | ||| || | || || ||||| ||||| |||||
Sbjct 341901 CATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGT 341960
Query 156323 AGGTGTTGCATGAATAAAATA-CTTATTAGACATATAATCGTATGTCTCCTTAATCTTCT 156381
|| | || || | || || |||| |||||| | ||| || ||| || ||| |
Sbjct 341961 TGGCGAAGCGTGTGTGAAGTATCTTA-GAGACATTAGGTTGTAAGTTTCCAAAACCTTTT 342019
Query 156382 CAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTA 156441
||| || ||||| |||| || || || ||||| ||| || |||||||| ||
Sbjct 342020 CAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAG 342079
Query 156442 CAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAAT 156501
||| | || | |||| || | ||| | ||||||| || || || ||||| || |
Sbjct 342080 CAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGT 342139
Query 156502 CAAACAGAAAATCACGGTTGTAATCAATC 156530
|| | ||||| | || ||| |||||
Sbjct 342140 TGAATTGGAAATCTCTGTCGTAGACAATC 342168
Score = 109 bits (120), Expect = 2e-18
Identities = 333/502 (66%), Gaps = 16/502 (3%)
Strand=Plus/Minus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|| || || ||||||| | | ||||| || || | | ||| | ||| ||||| |
Sbjct 641622 CTGTCGAATCTACCAGGTCTCATCAATGCGGGATCAAGAACATCAGGTCTATTTGTACCG 641563
Query 288910 GCCAATACAACAATA-GAT-TCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGAT 288967
|| | |||||||| ||| || | | | || |||||||| ||||| |||||
Sbjct 641562 GCAAGAACAACAATTTGATCTCTGGAAG--TGAAACCATCCATCTCAACTAAAAGTTGAT 641505
Query 288968 TAAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCACCCGAATCGCTCCttt 289024
| | || ||| |||||||| |||| ||||| ||| | |||| || ||| |||
Sbjct 641504 TCAAAGTGGCTTCTCTTTCATCGTTTGCACCTCCCATTGCACCACCTTT-TC-CTC-TTT 641448
Query 289025 ttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAG--AATTTTGTCTCGC 289082
||||||| |||||| |||||||| | ||| || | || | || ||| || ||
Sbjct 641447 CCTTACCAATAGCATCGATTTCGTCCACGAAGATAATTGCTGGGGCTAACTTT--CTTGC 641390
Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142
| | || || || | |||||||| || |||| ||||||| ||||||||||||||||
Sbjct 641389 GTTCTCGAACAAATCACGAACACGGGAAGCACCAACACCAACAAACATTTCTACAAATTC 641330
Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202
||| | || || | |||| ||| |||||| || || ||| | || | |
Sbjct 641329 GGAACCTGACACAGACAAAAATGGAACACCTGCTTCACCGGCAGTTGCTTTTGCTAACAA 641270
Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAG 289261
|| |||||||| || ||||| || ||| | | || |||| | || || ||||
Sbjct 641269 AGTTTTACCTGTACCTGGTGGACCAGATAAAATTGCACCTCTTGGGATTTGAGCACCCAA 641210
Query 289262 CAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321
| || || ||||| || ||| ||| || | || | |||| || ||| |||||
Sbjct 641209 C-TTTTTGTACTTCTCTGGCTTCTGTAAGAAATGGACGAATTCCATAATTTCGCTTTTTG 641151
Query 289322 CCTCATCACATCCTGCTACATC 289343
| |||| ||| ||||| |||||
Sbjct 641150 CTTCATTACAACCTGCCACATC 641129
Score = 96.9 bits (106), Expect = 1e-14
Identities = 121/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAG 155648
||||| |||| ||||| || || || || | || |||||| || || |||||
Sbjct 341224 ATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCACAA 341283
Query 155649 CACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCA 155708
|||| ||| ||| |||||| || || || ||||| || ||| || |||||||||||
Sbjct 341284 CACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCA 341343
Query 155709 TCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCA 155754
||||||||||| ||| ||||||| || || || | || || ||||
Sbjct 341344 TCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCA 341389
>seq5
Length=1351988
Score = 111 bits (122), Expect = 5e-19
Identities = 483/753 (64%), Gaps = 17/753 (2%)
Strand=Plus/Minus
Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687
|| || || || || ||||| || || ||||| ||| ||| ||||| || ||||||
Sbjct 97345 CTATACTCCACGATTTCACAACAAAGATTAGACGACTTAATGACACCTAAGTTTTTCTGG 97286
Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747
|| || || || || | |||||| || || ||| | || |||||||||| | ||
Sbjct 97285 TTGGACTTCTCATTGCATGAATCCTTATAAAGCATGAAAGGAACTCCTGTCTCCGTTTGA 97226
Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTG-TTGTATCTGCCTTC 155806
| ||||| | ||| | | | || || |||| || ||| | | |||
Sbjct 97225 CTTTGTAGAATTTCCGACCAAATTTGTTGCGCTTTCATTTTTTTCATTGGAA-TCAATTC 97167
Query 155807 CGACTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCA 155864
|||||| ||||||||| | ||| | | || ||| || || ||| | ||
Sbjct 97166 TCGCTCATACTTTTCATATA--GGGTTTTGAACTCTGTACCATAGCAGTCAGATAAACCT 97109
Query 155865 GGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAAT 155924
| | ||| || | ||| | |||||| || |||| ||||| | ||||||
Sbjct 97108 GTTGCTTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAA 97049
Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGA 155984
| ||| ||| | |||||| || | ||| | ||| | || || | ||||||
Sbjct 97048 AGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGA 96989
Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044
||||| | ||| | |||||| || |||||| ||| ||| |||| || ||| |
Sbjct 96988 TTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATACAA 96929
Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101
|| |||| | ||| ||||| ||||| ||||| | || || || || || ||
Sbjct 96928 AAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACC 96869
Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161
| |||||||||| | |||||| ||||| ||||| | || |||| | |||| |
Sbjct 96868 CGCAGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATAAGCACCATTT 96809
Query 156162 GAGCGAACATTATGA-ATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCA 156220
| | | ||| ||| | ||||| |||||||||||| || || || || |||
Sbjct 96808 GCCCTTATATT-TGACACATGTATTCCAATACCACCAGATGCCTTTGATATCAAAGCAGT 96750
Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCA 156280
| | || ||| || ||||||| |||||||| || |||||||| | | ||| ||||
Sbjct 96749 CTTGTGTAAAGTCTTATAAATACCATCAATAGAGTCTTCTTCCATAGCCACAAGAAAGCA 96690
Query 156281 CGA--ACTTA-ATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAAT 156337
|| || | ||||| | || | || ||||| | ||||||| || |||||
Sbjct 96689 TGATGACAAATATTGATTTACTG---TACCGCTATTGAACAAAGTAGGTGAAGCGTGAAT 96633
Query 156338 AAAATACTTATTAGACATATAATCGTATGTCTC 156370
||||||||| | ||||| | | ||| |||||
Sbjct 96632 AAAATACTTTTGTGACATTAATTGGTAAGTCTC 96600
>seq6
Length=1212614
Score = 98.7 bits (108), Expect = 3e-15
Identities = 175/253 (69%), Gaps = 2/253 (1%)
Strand=Plus/Minus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
||| ||| || |||||| ||||| | | || | ||||||||| || ||||| || ||
Sbjct 1098908 ATCGTAATGAACCATAATATCTTCTAAAGCTTTAACTAAACGACGTTGGATATACCCGGT 1098849
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| |||||| ||||| |||||||| | ||| ||||||||||||| |||||||| ||
Sbjct 1098848 CTCTGCTGTTTTCACAGCAGTATCAATCAAACCTTCACGACCACCCATCGCATGGAAAAA 1098789
Query 302673 TAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731
| ||||| || | | || | ||| || ||| | ||||||||||| | || |
Sbjct 1098788 GAACTCTTGAGGAGTTAAACCTCTCAAGTAA-GAGTTTTCAACGAAACCCTTTGATTCTG 1098730
Query 302732 GCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATAC 302791
| || | ||| ||| | || ||||| ||||| | | || | ||| | | ||||
Sbjct 1098729 GAGAGTAGTCATCCTTAGAGAAATGTGGTAGGGTACGATCGGCAAACCCGAAAGCAATAC 1098670
Query 302792 GCTTTCCATCAAC 302804
|||| || || ||
Sbjct 1098669 GCTTACCTTCCAC 1098657
>seq8
Length=945852
Score = 93.3 bits (102), Expect = 1e-13
Identities = 158/227 (70%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 60142 TGTGAAAATATACCTCTCGGAT--GCTGCGTCCTTGCCACCCATAAGACGGGTTCCAAAT 60199
|||||| ||||| ||||||| |||| || || ||||| || | ||| || ||
Sbjct 479398 TGTGAAGATATA--TCTCGGAGCAGCTGAATCTTTACCACCAGTAGCTCTGGTACCGAAA 479455
Query 60200 TGTCCGTTTGGCTGGAATAGATTAATGTTGTTAGAGCCTACGAAATTTTGAGCGAGACCA 60259
|| || |||| || | | ||| |||||||| || || |||| ||| || | ||||
Sbjct 479456 GCACCATTAGGCTTCAACAAGTAAATATTGTTAGAACCAACAAAATCTTGGGCTAAACCA 479515
Query 60260 ACAATAGCACCATTTAAACTGGCTTCACCGTGATGATATCCAGAATGTTCTGAAACATAT 60319
||||| | || || |||||||||||||| ||||| | |||||| ||||||||
Sbjct 479516 ACAATCGTTTGATATAGGGAAGCTTCACCGTGATGGTATCCGGTATGTTCAGAAACATAA 479575
Query 60320 CCACTGAATTGTGCGACTTTAATTTCGGAGTGGAGTTTTTTCTTGAA 60366
|||| | ||| || || || ||||| || | | ||| |||| ||
Sbjct 479576 CCACCTAGTTGAGCAACCTTGATTTCTGATTTTAAATTTCTCTTAAA 479622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817430281033
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