Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq7 161 3e-34 seq5 111 5e-19 seq6 98.7 3e-15 seq8 93.3 1e-13 >seq7 Length=940253 Score = 161 bits (178), Expect = 3e-34 Identities = 343/509 (67%), Gaps = 5/509 (1%) Strand=Plus/Plus Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCG 156082 |||||| | |||| || || |||| |||||| ||||| || || || || || Sbjct 341661 TGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACG 341720 Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142 |||||| || ||||| |||| | ||| ||||||||||| || ||||| || || || || Sbjct 341721 AGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACC 341780 Query 156143 GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCA 156202 ||| | ||||| | || |||| || ||||| || | ||||||||||| | Sbjct 341781 AGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGT 341840 Query 156203 TTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTC 156262 ||||| || || |||||||| | ||| | | ||||||||||||| ||||| || | Sbjct 341841 CTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTT 341900 Query 156263 CATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGT 156322 ||| | | ||| | || || | ||| || | || || ||||| ||||| ||||| Sbjct 341901 CATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGT 341960 Query 156323 AGGTGTTGCATGAATAAAATA-CTTATTAGACATATAATCGTATGTCTCCTTAATCTTCT 156381 || | || || | || || |||| |||||| | ||| || ||| || ||| | Sbjct 341961 TGGCGAAGCGTGTGTGAAGTATCTTA-GAGACATTAGGTTGTAAGTTTCCAAAACCTTTT 342019 Query 156382 CAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTA 156441 ||| || ||||| |||| || || || ||||| ||| || |||||||| || Sbjct 342020 CAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAG 342079 Query 156442 CAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAAT 156501 ||| | || | |||| || | ||| | ||||||| || || || ||||| || | Sbjct 342080 CAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGT 342139 Query 156502 CAAACAGAAAATCACGGTTGTAATCAATC 156530 || | ||||| | || ||| ||||| Sbjct 342140 TGAATTGGAAATCTCTGTCGTAGACAATC 342168 Score = 109 bits (120), Expect = 2e-18 Identities = 333/502 (66%), Gaps = 16/502 (3%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 || || || ||||||| | | ||||| || || | | ||| | ||| ||||| | Sbjct 641622 CTGTCGAATCTACCAGGTCTCATCAATGCGGGATCAAGAACATCAGGTCTATTTGTACCG 641563 Query 288910 GCCAATACAACAATA-GAT-TCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGAT 288967 || | |||||||| ||| || | | | || |||||||| ||||| ||||| Sbjct 641562 GCAAGAACAACAATTTGATCTCTGGAAG--TGAAACCATCCATCTCAACTAAAAGTTGAT 641505 Query 288968 TAAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCACCCGAATCGCTCCttt 289024 | | || ||| |||||||| |||| ||||| ||| | |||| || ||| ||| Sbjct 641504 TCAAAGTGGCTTCTCTTTCATCGTTTGCACCTCCCATTGCACCACCTTT-TC-CTC-TTT 641448 Query 289025 ttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAG--AATTTTGTCTCGC 289082 ||||||| |||||| |||||||| | ||| || | || | || ||| || || Sbjct 641447 CCTTACCAATAGCATCGATTTCGTCCACGAAGATAATTGCTGGGGCTAACTTT--CTTGC 641390 Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142 | | || || || | |||||||| || |||| ||||||| |||||||||||||||| Sbjct 641389 GTTCTCGAACAAATCACGAACACGGGAAGCACCAACACCAACAAACATTTCTACAAATTC 641330 Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 ||| | || || | |||| ||| |||||| || || ||| | || | | Sbjct 641329 GGAACCTGACACAGACAAAAATGGAACACCTGCTTCACCGGCAGTTGCTTTTGCTAACAA 641270 Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAG 289261 || |||||||| || ||||| || ||| | | || |||| | || || |||| Sbjct 641269 AGTTTTACCTGTACCTGGTGGACCAGATAAAATTGCACCTCTTGGGATTTGAGCACCCAA 641210 Query 289262 CAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321 | || || ||||| || ||| ||| || | || | |||| || ||| ||||| Sbjct 641209 C-TTTTTGTACTTCTCTGGCTTCTGTAAGAAATGGACGAATTCCATAATTTCGCTTTTTG 641151 Query 289322 CCTCATCACATCCTGCTACATC 289343 | |||| ||| ||||| ||||| Sbjct 641150 CTTCATTACAACCTGCCACATC 641129 Score = 96.9 bits (106), Expect = 1e-14 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAG 155648 ||||| |||| ||||| || || || || | || |||||| || || ||||| Sbjct 341224 ATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCACAA 341283 Query 155649 CACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCA 155708 |||| ||| ||| |||||| || || || ||||| || ||| || ||||||||||| Sbjct 341284 CACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCA 341343 Query 155709 TCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCA 155754 ||||||||||| ||| ||||||| || || || | || || |||| Sbjct 341344 TCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCA 341389 >seq5 Length=1351988 Score = 111 bits (122), Expect = 5e-19 Identities = 483/753 (64%), Gaps = 17/753 (2%) Strand=Plus/Minus Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 || || || || || ||||| || || ||||| ||| ||| ||||| || |||||| Sbjct 97345 CTATACTCCACGATTTCACAACAAAGATTAGACGACTTAATGACACCTAAGTTTTTCTGG 97286 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 || || || || || | |||||| || || ||| | || |||||||||| | || Sbjct 97285 TTGGACTTCTCATTGCATGAATCCTTATAAAGCATGAAAGGAACTCCTGTCTCCGTTTGA 97226 Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTG-TTGTATCTGCCTTC 155806 | ||||| | ||| | | | || || |||| || ||| | | ||| Sbjct 97225 CTTTGTAGAATTTCCGACCAAATTTGTTGCGCTTTCATTTTTTTCATTGGAA-TCAATTC 97167 Query 155807 CGACTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCA 155864 |||||| ||||||||| | ||| | | || ||| || || ||| | || Sbjct 97166 TCGCTCATACTTTTCATATA--GGGTTTTGAACTCTGTACCATAGCAGTCAGATAAACCT 97109 Query 155865 GGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAAT 155924 | | ||| || | ||| | |||||| || |||| ||||| | |||||| Sbjct 97108 GTTGCTTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAA 97049 Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGA 155984 | ||| ||| | |||||| || | ||| | ||| | || || | |||||| Sbjct 97048 AGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGA 96989 Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044 ||||| | ||| | |||||| || |||||| ||| ||| |||| || ||| | Sbjct 96988 TTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATACAA 96929 Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101 || |||| | ||| ||||| ||||| ||||| | || || || || || || Sbjct 96928 AAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACC 96869 Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161 | |||||||||| | |||||| ||||| ||||| | || |||| | |||| | Sbjct 96868 CGCAGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATAAGCACCATTT 96809 Query 156162 GAGCGAACATTATGA-ATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCA 156220 | | | ||| ||| | ||||| |||||||||||| || || || || ||| Sbjct 96808 GCCCTTATATT-TGACACATGTATTCCAATACCACCAGATGCCTTTGATATCAAAGCAGT 96750 Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCA 156280 | | || ||| || ||||||| |||||||| || |||||||| | | ||| |||| Sbjct 96749 CTTGTGTAAAGTCTTATAAATACCATCAATAGAGTCTTCTTCCATAGCCACAAGAAAGCA 96690 Query 156281 CGA--ACTTA-ATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAAT 156337 || || | ||||| | || | || ||||| | ||||||| || ||||| Sbjct 96689 TGATGACAAATATTGATTTACTG---TACCGCTATTGAACAAAGTAGGTGAAGCGTGAAT 96633 Query 156338 AAAATACTTATTAGACATATAATCGTATGTCTC 156370 ||||||||| | ||||| | | ||| ||||| Sbjct 96632 AAAATACTTTTGTGACATTAATTGGTAAGTCTC 96600 >seq6 Length=1212614 Score = 98.7 bits (108), Expect = 3e-15 Identities = 175/253 (69%), Gaps = 2/253 (1%) Strand=Plus/Minus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||| ||| || |||||| ||||| | | || | ||||||||| || ||||| || || Sbjct 1098908 ATCGTAATGAACCATAATATCTTCTAAAGCTTTAACTAAACGACGTTGGATATACCCGGT 1098849 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | |||||| ||||| |||||||| | ||| ||||||||||||| |||||||| || Sbjct 1098848 CTCTGCTGTTTTCACAGCAGTATCAATCAAACCTTCACGACCACCCATCGCATGGAAAAA 1098789 Query 302673 TAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731 | ||||| || | | || | ||| || ||| | ||||||||||| | || | Sbjct 1098788 GAACTCTTGAGGAGTTAAACCTCTCAAGTAA-GAGTTTTCAACGAAACCCTTTGATTCTG 1098730 Query 302732 GCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATAC 302791 | || | ||| ||| | || ||||| ||||| | | || | ||| | | |||| Sbjct 1098729 GAGAGTAGTCATCCTTAGAGAAATGTGGTAGGGTACGATCGGCAAACCCGAAAGCAATAC 1098670 Query 302792 GCTTTCCATCAAC 302804 |||| || || || Sbjct 1098669 GCTTACCTTCCAC 1098657 >seq8 Length=945852 Score = 93.3 bits (102), Expect = 1e-13 Identities = 158/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 60142 TGTGAAAATATACCTCTCGGAT--GCTGCGTCCTTGCCACCCATAAGACGGGTTCCAAAT 60199 |||||| ||||| ||||||| |||| || || ||||| || | ||| || || Sbjct 479398 TGTGAAGATATA--TCTCGGAGCAGCTGAATCTTTACCACCAGTAGCTCTGGTACCGAAA 479455 Query 60200 TGTCCGTTTGGCTGGAATAGATTAATGTTGTTAGAGCCTACGAAATTTTGAGCGAGACCA 60259 || || |||| || | | ||| |||||||| || || |||| ||| || | |||| Sbjct 479456 GCACCATTAGGCTTCAACAAGTAAATATTGTTAGAACCAACAAAATCTTGGGCTAAACCA 479515 Query 60260 ACAATAGCACCATTTAAACTGGCTTCACCGTGATGATATCCAGAATGTTCTGAAACATAT 60319 ||||| | || || |||||||||||||| ||||| | |||||| |||||||| Sbjct 479516 ACAATCGTTTGATATAGGGAAGCTTCACCGTGATGGTATCCGGTATGTTCAGAAACATAA 479575 Query 60320 CCACTGAATTGTGCGACTTTAATTTCGGAGTGGAGTTTTTTCTTGAA 60366 |||| | ||| || || || ||||| || | | ||| |||| || Sbjct 479576 CCACCTAGTTGAGCAACCTTGATTTCTGATTTTAAATTTCTCTTAAA 479622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817430281033