Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq8 105 8e-18 seq1 95.1 2e-14 >seq8 Length=945852 Score = 105 bits (116), Expect = 8e-18 Identities = 178/257 (69%), Gaps = 22/257 (9%) Strand=Plus/Minus Query 162943 TCAAAGAAAGGTTATTTATGCCA----TAAGaaaaaaaTTTAGATCAAAAGGGGATTTTA 162998 ||||||||||||||| |||||| ||||| ||| || | |||| || | Sbjct 479647 TCAAAGAAAGGTTATCTATGCCTGTTTTAAGAGAAAT-TTAAAATCAGAA---------A 479598 Query 162999 TTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAAC 163058 | |||||||||||| || |||| |||||| | ||||| || | || | ||||||||| Sbjct 479597 TCAAGGTTGCTCAACTAGGTGGTTATGTTTCTGAACATACCGGATACCATCACGGTGAAG 479538 Query 163059 AAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAG 163118 ||| | |||| || || || |||||||||||||||||| | || ||||| Sbjct 479537 CTTCCCTATATCAAACGATTGTTGGTTTAGCCCAAGATTTTGTTGGTTCTAACAATAT-- 479480 Query 163119 CATTACTTG----AACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCT 163174 ||||||| | ||| ||||| || ||||||||| || ||||||||||| Sbjct 479479 --TTACTTGTTGAAGCCTAATGGTGCTTTCGGTACCAGAGCTACTGGTGGTAAAGATTCA 479422 Query 163175 GCGGCATCAAGATATAT 163191 || || | |||||||| Sbjct 479421 GCTGCTCCGAGATATAT 479405 >seq1 Length=1722779 Score = 95.1 bits (104), Expect = 2e-14 Identities = 234/350 (67%), Gaps = 9/350 (3%) Strand=Plus/Plus Query 168459 TTTGATTTAAGTGGTGGAACTATCCCACTTCTTACTACCaaaaaaaTTGTATACAC---T 168515 |||||||| |||| || | | |||||||| |||||||| ||| || | || | Sbjct 858344 TTTGATTTGAGTGATGATAAATTTCCACTTCTAACTACCAAGAAAGTTTTCACCAAGGGT 858403 Query 168516 AACATTCTTAAAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAAT 168575 | |||||| || ||||||||| |||| || | |||||| || || | | Sbjct 858404 ATTATTCTT---GAGCTTTTATGGTTTATTTCTGGCTGTACTGATGGTAAGAAACTCTCT 858460 Query 168576 GATATAGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGT 168635 ||| |||||| || | ||| | | || || || ||||| | || || | | || Sbjct 858461 GATCAAGGTGTGAAGATCTGGGAAGGGAACGGATCCCGTGAGTACTTGGACTCCTTGGGA 858520 Query 168636 TTTACCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCA 168695 |||| || ||| || |||||||| || ||| ||||||| || |||||||||||| Sbjct 858521 CTTACAGATAGACGTGAGGGTGATTTGGGACCAGTTTATGGGTTCCAATGGAGACATTTC 858580 Query 168696 GGAGCTCAATATATTGAC-TGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAG 168754 ||||| |||| | ||| ||||| ||||| | |||||||| || || || ||||| Sbjct 858581 GGAGCAGAATACA-AGACATGTGACGATGATTATTCGGGACAAGGTGTTGATCAGTTAAG 858639 Query 168755 TCAAACTATAAATACTTTACACAACAATCCGGAAAATAGAA-GAATATTA 168803 | || ||| || | |||||||| | |||||| || ||||| Sbjct 858640 CGATGTGATTCATAAGTTGAAGAACAATCCTTACGATAGAAGGATTATTA 858689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635177528542520