Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq8 105 8e-18
seq1 95.1 2e-14
>seq8
Length=945852
Score = 105 bits (116), Expect = 8e-18
Identities = 178/257 (69%), Gaps = 22/257 (9%)
Strand=Plus/Minus
Query 162943 TCAAAGAAAGGTTATTTATGCCA----TAAGaaaaaaaTTTAGATCAAAAGGGGATTTTA 162998
||||||||||||||| |||||| ||||| ||| || | |||| || |
Sbjct 479647 TCAAAGAAAGGTTATCTATGCCTGTTTTAAGAGAAAT-TTAAAATCAGAA---------A 479598
Query 162999 TTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAAC 163058
| |||||||||||| || |||| |||||| | ||||| || | || | |||||||||
Sbjct 479597 TCAAGGTTGCTCAACTAGGTGGTTATGTTTCTGAACATACCGGATACCATCACGGTGAAG 479538
Query 163059 AAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAG 163118
||| | |||| || || || |||||||||||||||||| | || |||||
Sbjct 479537 CTTCCCTATATCAAACGATTGTTGGTTTAGCCCAAGATTTTGTTGGTTCTAACAATAT-- 479480
Query 163119 CATTACTTG----AACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCT 163174
||||||| | ||| ||||| || ||||||||| || |||||||||||
Sbjct 479479 --TTACTTGTTGAAGCCTAATGGTGCTTTCGGTACCAGAGCTACTGGTGGTAAAGATTCA 479422
Query 163175 GCGGCATCAAGATATAT 163191
|| || | ||||||||
Sbjct 479421 GCTGCTCCGAGATATAT 479405
>seq1
Length=1722779
Score = 95.1 bits (104), Expect = 2e-14
Identities = 234/350 (67%), Gaps = 9/350 (3%)
Strand=Plus/Plus
Query 168459 TTTGATTTAAGTGGTGGAACTATCCCACTTCTTACTACCaaaaaaaTTGTATACAC---T 168515
|||||||| |||| || | | |||||||| |||||||| ||| || | || |
Sbjct 858344 TTTGATTTGAGTGATGATAAATTTCCACTTCTAACTACCAAGAAAGTTTTCACCAAGGGT 858403
Query 168516 AACATTCTTAAAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAAT 168575
| |||||| || ||||||||| |||| || | |||||| || || | |
Sbjct 858404 ATTATTCTT---GAGCTTTTATGGTTTATTTCTGGCTGTACTGATGGTAAGAAACTCTCT 858460
Query 168576 GATATAGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGT 168635
||| |||||| || | ||| | | || || || ||||| | || || | | ||
Sbjct 858461 GATCAAGGTGTGAAGATCTGGGAAGGGAACGGATCCCGTGAGTACTTGGACTCCTTGGGA 858520
Query 168636 TTTACCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCA 168695
|||| || ||| || |||||||| || ||| ||||||| || ||||||||||||
Sbjct 858521 CTTACAGATAGACGTGAGGGTGATTTGGGACCAGTTTATGGGTTCCAATGGAGACATTTC 858580
Query 168696 GGAGCTCAATATATTGAC-TGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAG 168754
||||| |||| | ||| ||||| ||||| | |||||||| || || || |||||
Sbjct 858581 GGAGCAGAATACA-AGACATGTGACGATGATTATTCGGGACAAGGTGTTGATCAGTTAAG 858639
Query 168755 TCAAACTATAAATACTTTACACAACAATCCGGAAAATAGAA-GAATATTA 168803
| || ||| || | |||||||| | |||||| || |||||
Sbjct 858640 CGATGTGATTCATAAGTTGAAGAACAATCCTTACGATAGAAGGATTATTA 858689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635177528542520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |