Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq2 123 2e-23 seq3 120 3e-22 >seq2 Length=1688883 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| || | ||| ||||| |||| ||||||||| ||||| |||||||| ||| Sbjct 908438 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 908379 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || |||||| | ||||||||||||| | |||| | ||| || || ||||| Sbjct 908378 AGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 908319 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| ||| || ||| | | || | ||||| | | ||| ||| Sbjct 908318 ATACCTTCCTTGTCTTGAATCTTAGATTTCACATTGTCAATAGTGTCAGAAGATTCGACT 908259 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | ||| | ||||| || ||||| || || ||||| ||||||||| Sbjct 908258 TCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 908211 >seq3 Length=1564943 Score = 120 bits (132), Expect = 3e-22 Identities = 296/436 (68%), Gaps = 15/436 (3%) Strand=Plus/Plus Query 50280 GCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCA 50339 || ||| | || || ||||| || || |||||||||||||| || ||| ||| || Sbjct 415763 GCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTCGCT 415822 Query 50340 GCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTG 50399 ||||| || | | || | || | ||||| || | || || ||||| ||| Sbjct 415823 GCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTG 415882 Query 50400 ATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTA 50459 |||| | || ||||| ||||||| |||||||| |||||| | | || | | Sbjct 415883 ATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTATTCCAT---CATTTG 415939 Query 50460 AATGAAAAATTATCATACGAAACAATTTTGGAC--ATGTTCAAAGAAGCCGTCGACATCG 50517 || ||| || || | ||| | | | | | || ||| |||||| || || |||| Sbjct 415940 AA-GAACAAGCCAGATCC-AAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCG 415997 Query 50518 AAAAAGAGTTT-TTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATG 50576 |||| ||| | |||| |||||| ||||||| | | ||||| |||||||| || || Sbjct 415998 AAAA-GAGATACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTG 416056 Query 50577 ATGTGCGAGTACATTGAGTTTGTTGCAGACAGA-TTGTTGTTGCAGCTGG-GACAACCGA 50634 ||| | | ||| | || ||||||||||||||| | | ||||| || |||| || Sbjct 416057 ATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAA--GA 416114 Query 50635 AATACTATAATG-CACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAA 50693 ||||||| || | ||| |||||| || |||||| | ||||| || |||| || ||| Sbjct 416115 AATACTACAACGTCAC-TAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAA 416173 Query 50694 ACAAACTTTTTCGAAA 50709 || || || ||||||| Sbjct 416174 ACCAATTTCTTCGAAA 416189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543945038800