Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq5 172 1e-37
seq7 122 2e-22
seq4 111 4e-19
seq8 93.3 1e-13
seq6 91.5 3e-13
>seq5
Length=1351988
Score = 172 bits (190), Expect = 1e-37
Identities = 332/484 (69%), Gaps = 7/484 (1%)
Strand=Plus/Plus
Query 110514 TTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCT 110573
||| | || ||||||||| | | || | || || |||||||| ||||||||| | ||
Sbjct 96681 TTGTCATCATGCTTTCTTGTGGCTATGGAAGAAGACTCTATTGATGGTATTTATAAGACT 96740
Query 110574 CTTAAAGAA-ACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGT-TCATG 110631
||| | || |||||| | || || || ||||| || ||||| || || || |||
Sbjct 96741 -TTACACAAGACTGCTTTGATATCAAAGGCATCTGGTGGTATTGGAATACATGTGTCAA- 96798
Query 110632 ATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTC 110691
|||| | |||| || || ||||| || |||| ||| |||||| ||| | ||||
Sbjct 96799 ATATAAGGGCAAATGGTGCTTATATCTCAGGGTCGAATGGTACTTCAAATGGTTTAGTTC 96858
Query 110692 CAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAA-- 110749
| ||| | | || || ||| |||| |||| |||||| |||||||||| || | |
Sbjct 96859 CTATGCTGCGGGTTTTTAACAACACAGCAAGATATGTCGATCAAGGTGGGAACAAACGCC 96918
Query 110750 -TGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAAC 110808
||| | ||| ||| || | ||||| |||||| ||||| |||| |||||| |||
Sbjct 96919 CTGGTGCCTTTTGTATATACTTGGAACCATGGCATGGGGATATTATTGACTTCTTACAAC 96978
Query 110809 TTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGA 110868
| | || ||||| ||| |||||| || || || || ||||||||||| | ||||
Sbjct 96979 TAAGAAAGAATCACGGAAAAGAAGAAATGAGGGCCCGAGACTTATTTTATGCTCTATGGA 97038
Query 110869 TTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTC 110928
|| | ||| | || ||| |||||||| || | |||| ||||| || | ||||
Sbjct 97039 TTCCGGATCTTTTTATGCAACGTGTTGAAAATAATGAAGATTGGTCCATTTTTAGTCCAG 97098
Query 110929 ATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAAT 110988
|| | | ||| ||||||| ||||| | |||||| || ||| || ||||| |
Sbjct 97099 ATGAAGCAACAGGTTTATCTGACTGCTATGGTACAGAGTTCAAAACCCTATATGAAAAGT 97158
Query 110989 ATGA 110992
||||
Sbjct 97159 ATGA 97162
>seq7
Length=940253
Score = 122 bits (134), Expect = 2e-22
Identities = 383/590 (65%), Gaps = 5/590 (1%)
Strand=Plus/Minus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
|||| || |||||||| || | |||||| |||| || || | |||| || || |
Sbjct 342139 ACTACTTCGGTTTCAAGACCTTGGAACGTTCTTACTTGCTAAGAATCAACGGTAAGGTTG 342080
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
||||||||||||||||||| | | | || || | ||||| || || ||||||
Sbjct 342079 CTGAACGTCCTCAACACATGATCATGAGAGTGGCTGTCGGTATCCACGGTAGAGATATTG 342020
Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACTCCT 110480
|| ||| | ||| ||| | || | | || || | | | || ||| | ||
Sbjct 342019 AAAAGGTTTTGGAAACTTACAACCTAATGTCTCTAA-GATACTTCACACACGCTTCGCCA 341961
Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540
|| || || || || || ||| | |||| || | || || || || | | ||
Sbjct 341960 ACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATG 341901
Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600
|| || ||||| |||||||||||||| || || | || ||| ||| | || |||||
Sbjct 341900 AAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAG 341841
Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660
| | |||| || |||||| | ||| |||| | ||||| || | || | | || ||
Sbjct 341840 ACCGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCTACCGGTTCTTACATTGCT 341781
Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720
| || ||| |||| | || || |||||||| | | || |||||| |||||||
Sbjct 341780 GGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCT 341721
Query 110721 AAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCT 110777
|| || | ||||||||| |||||| ||| | || || | || |||| ||
Sbjct 341720 CGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCA 341661
Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837
||||| |||||||| || || ||| | || | | || || || || ||||||
Sbjct 341660 TGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATC 341601
Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAA 110887
| ||| | || || || ||| | ||||| ||||| | ||||||||
Sbjct 341600 CGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAA 341551
>seq4
Length=1422013
Score = 111 bits (122), Expect = 4e-19
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 167642 ATCGATGAAACTTTTCCAGATTTTTATCGAACCACGTCGTTTGCATTCATCGTAAAAACC 167701
|||||||||| | ||||||||||| || || |||| ||| ||||| || ||||| ||
Sbjct 1350863 ATCGATGAAAGTCTTCCAGATTTTGATATTACACCGTCTTTTACATTCGTCATAAAAGCC 1350922
Query 167702 ATAGTCTCTTGAGATATCAGCACATTCGTGATTTCCTCTTAATAAAATTATGTTATTTNN 167761
|| |||| | | || ||||||||| ||||| ||||| || | || | ||| | |
Sbjct 1350923 GTAAACTCTCGTAACATTAGCACATTCATGATTCCCTCTCAAAAGAAAAAAGTTCTCTGG 1350982
Query 167762 NNNNNNNNNNNTGTAGCAAAATAATAACAAAATTGTTTCTAATGATTTAACACCTCTATC 167821
| || |||| | | || ||||||||||||||||| |||||||||
Sbjct 1350983 ATATTTGATCTTATAACAAAGAAGAAGCAGAATTGTTTCTAATGATTGCTTACCTCTATC 1351042
Query 167822 AACATAATCACCTAAAAATATATATTT 167848
|| || ||||||||||||| ||| ||
Sbjct 1351043 CACGTAGTCACCTAAAAATAGATAATT 1351069
>seq8
Length=945852
Score = 93.3 bits (102), Expect = 1e-13
Identities = 143/203 (70%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 279857 TCTATTCCTCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGT 279916
||||||||| || | ||||| || |||||| || | ||| |||| | |||
Sbjct 479682 TCTATTCCTTCCGTATTAGATGGGTTAAAACCTGGTCAAAGAAAGGTTATCTATGCCTGT 479623
Query 279917 TTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAA 279976
|| || ||||| || | ||||| |||||||| ||| ||||||||||| |||
Sbjct 479622 TTTAAGAGAAATTTAAAATCAGAAATCAAGGTTGCTCAACTAGGTGGTTATGTTTCTGAA 479563
Query 279977 CATGCAGGTTATCATCACGGTGAAGCGTCTCT---TCAAGGTGCTATTGTAGGTCTTGCC 280033
||| | || || |||||||||||||| || || |||| | ||||| ||| | |||
Sbjct 479562 CATACCGGATACCATCACGGTGAAGCTTCCCTATATCAAA---CGATTGTTGGTTTAGCC 479506
Query 280034 CAAGATTTTATGGCTTCAAACAA 280056
||||||||| | | ||| |||||
Sbjct 479505 CAAGATTTTGTTGGTTCTAACAA 479483
>seq6
Length=1212614
Score = 91.5 bits (100), Expect = 3e-13
Identities = 126/173 (73%), Gaps = 4/173 (2%)
Strand=Plus/Plus
Query 305317 TGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGC 305376
||| |||||| ||| | |||||| | |||||||| || || || ||||||||||||||
Sbjct 1097660 TGATAATGATCCCGTTTTATTCAATCGTCAACCATCCCTTCACAAGATGTCTATGATGGC 1097719
Query 305377 TCATAAAGTCAAAGTATTAT-CTGGATTG-ACATTTCGATTAAATGTAAGTGCTTGTACG 305434
|| | ||| || || ||| | | ||| || || | ||||| | || | |
Sbjct 1097720 ACACAGAGTTAAGGT--TATGCCGTATTCTACCTTCAGGCTAAATTTGTCTGTTACATCC 1097777
Query 305435 CCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487
||||||||||| ||||||||||| || ||||||||| | || || || |||||
Sbjct 1097778 CCTTATAATGCAGATTTTGATGGTGACGAAATGAATTTACACGTTCCACAATC 1097830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812663145649
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |