Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq2 123 2e-23
seq5 87.8 1e-12
>seq2
Length=1688883
Score = 123 bits (136), Expect = 2e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || || || || || || || ||||| |||||||| |||||
Sbjct 908439 ACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGA 908380
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | | |||| || |||||||| || ||||||||||| | || || ||| | ||
Sbjct 908379 TAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGG 908320
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||| || |||| |||| ||| | ||||| ||||| |
Sbjct 908319 AATACCTTCCTTGTCTTGAATCTTAGATTTC-ACATTGTCAATAGTGTCAGAAGATTCGA 908261
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || |||||||| || || || || ||||| ||||||
Sbjct 908260 CTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 908211
Score = 120 bits (132), Expect = 2e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| |||||||| | || ||||| || || ||| || ||||| |||||||| |||||
Sbjct 908667 ACCTCCTCTCAACCTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGA 908608
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | | |||| || |||||||| || ||||||||||| | || || ||| | ||
Sbjct 908607 TAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGG 908548
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||| || ||| || ||| |||| || | ||||| ||||| |
Sbjct 908547 AATACCTTCTTTATCTTGAATCTTAGACTTC-ACATTATCAATAGTGTCAGAAGATTCGA 908489
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || |||||||| || || || || ||||| ||||||
Sbjct 908488 CTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 908439
Score = 118 bits (130), Expect = 7e-22
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || || || || || || || ||||| |||||||| || ||
Sbjct 907983 ACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCAGA 907924
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | | |||| || |||||||| || ||||||||||| | || || ||| | ||
Sbjct 907923 TAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGG 907864
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| || || || || ||| |||| ||| | ||||| ||||| |
Sbjct 907863 AATACCTTCCTTATCTTGGATCTTAGACTTC-ACATTGTCAATAGTGTCAGAAGATTCAA 907805
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || |||||||||||||| || |||||||| |||||
Sbjct 907804 CTTCCAAAGTGATGGTCTTACCTGTTAACGTCTTGACAAAGATTTGCAT 907756
Score = 114 bits (126), Expect = 8e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || || || || || || || ||||| |||||||| || ||
Sbjct 908211 ACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCAGA 908152
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | | |||| || |||||||| || ||||||||||| | || || ||| | ||
Sbjct 908151 TAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGG 908092
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||| || ||| |||| ||| | ||||| ||||| |
Sbjct 908091 AATACCTTCCTTGTCTTGAATCTTAGACTTC-ACATTGTCAATAGTGTCAGAAGATTCGA 908033
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || |||||||| || || || || ||||| ||||||
Sbjct 908032 CTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 907983
>seq5
Length=1351988
Score = 87.8 bits (96), Expect = 1e-12
Identities = 159/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || ||||| || || || || ||||| |||||||| || |
Sbjct 1201240 CACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAG 1201181
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | | || |||||||| || || ||||| ||||| | || || ||| | |
Sbjct 1201180 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAG 1201121
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||| ||||| || || | | |||| ||| | ||||||| |||||
Sbjct 1201120 GAATACCTTCCTTGTCTTGGATCTT-AGACTTGACATTGTCAATGGTGTCGGAAGATTCG 1201062
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | || || || ||||| |||| || || || || || |||||
Sbjct 1201061 ACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1201012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703963945280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |