Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3 129 1e-24 seq5 122 2e-22 seq2 114 3e-20 >seq3 Length=1564943 Score = 129 bits (142), Expect = 1e-24 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 1518611 ACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCATTGACAATGTCAAGTCC 1518552 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | ||||| || || ||| Sbjct 1518551 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAG 1518492 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| || || |||||| | || |||||| |||| || || || || |||||| Sbjct 1518491 CAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATCCACCCTTCAC 1518432 Query 206374 CTTGTTTTGAGACT 206387 | || |||||||| Sbjct 1518431 TTGGTCTTGAGACT 1518418 >seq5 Length=1351988 Score = 122 bits (134), Expect = 2e-22 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || || || || |||||||| ||| ||| ||||| | || Sbjct 1201026 CAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCCGACACCATTGACAA 1201085 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || ||||| ||| || ||| |||||| | ||||| Sbjct 1201086 TGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATCTT 1201145 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| ||||||||||| || |||||| | || |||||| |||| || || || Sbjct 1201146 TGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATC 1201205 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| |||||| | || |||||| Sbjct 1201206 TACCCTTCACTTGGTCTTGAGA 1201227 >seq2 Length=1688883 Score = 114 bits (126), Expect = 3e-20 Identities = 159/222 (72%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| || || ||| ||| ||| | ||||| || || |||||||||||||| ||| Sbjct 907753 AAAATG---CAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAAGTTGAA 907809 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 ||||||||| | || || ||| ||||| ||||| || ||||| ||| || Sbjct 907810 TCTTCTGACACTATTGACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTATTCCTCCA 907869 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| |||||| | || || || || || || || ||||| ||||| ||| | | || Sbjct 907870 GACCAACAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCTGAC 907929 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 |||||| | || || || ||||| |||||| | || |||||| Sbjct 907930 TACAACATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGA 907971 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 908464 ACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCTGACACTATTGATAATGTGAAGTCT 908523 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| |||||||| ||| || ||| |||||| | || || || || || Sbjct 908524 AAGATTCAAGATAAAGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCGGGTAAA 908583 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || || ||||| ||||| ||| | |||| |||||| |||| || || || || || ||| Sbjct 908584 CAATTAGAAGACGGAAGAACTCTATCCGACTACAACATCCAAAAGGAATCCACACTCCAC 908643 Query 206374 CTTGTTTTGAG 206384 | || ||||| Sbjct 908644 TTGGTCTTGAG 908654 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 908008 ACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCTGACACTATTGACAATGTGAAGTCT 908067 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | || || || || || Sbjct 908068 AAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCGGGTAAA 908127 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || || ||||| ||||| ||| | | || |||||| | || || || ||||| |||||| Sbjct 908128 CAATTAGAAGACGGAAGAACTCTATCTGACTACAACATTCAAAAGGAATCTACACTTCAC 908187 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 908188 TTAGTCTTGAGA 908199 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| || || |||||||||||||| ||| ||||||||| | || || || Sbjct 908236 ACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCTGACACTATTGACAATGTGAAATCT 908295 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | || || || || || Sbjct 908296 AAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCTGGTAAA 908355 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || || ||||| ||||| ||| | |||| |||||| | || || || ||||| |||||| Sbjct 908356 CAATTAGAAGACGGAAGAACTCTATCCGACTACAACATTCAAAAGGAATCTACACTTCAC 908415 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 908416 TTAGTCTTGAGA 908427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820663721289