Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 1e-24
seq5 122 2e-22
seq2 114 3e-20
>seq3
Length=1564943
Score = 129 bits (142), Expect = 1e-24
Identities = 145/194 (75%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || |||||||||||||| ||| ||||||||| | || || |||
Sbjct 1518611 ACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCATTGACAATGTCAAGTCC 1518552
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| ||| || ||| |||||| | ||||| || || |||
Sbjct 1518551 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAG 1518492
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| || || |||||| | || |||||| |||| || || || || ||||||
Sbjct 1518491 CAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATCCACCCTTCAC 1518432
Query 206374 CTTGTTTTGAGACT 206387
| || ||||||||
Sbjct 1518431 TTGGTCTTGAGACT 1518418
>seq5
Length=1351988
Score = 122 bits (134), Expect = 2e-22
Identities = 148/202 (73%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || || || || || || |||||||| ||| ||| ||||| | ||
Sbjct 1201026 CAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCCGACACCATTGACAA 1201085
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| ||||| || ||||| ||| || ||| |||||| | |||||
Sbjct 1201086 TGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATCTT 1201145
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || ||||| ||||||||||| || |||||| | || |||||| |||| || || ||
Sbjct 1201146 TGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATC 1201205
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
||| |||||| | || ||||||
Sbjct 1201206 TACCCTTCACTTGGTCTTGAGA 1201227
>seq2
Length=1688883
Score = 114 bits (126), Expect = 3e-20
Identities = 159/222 (72%), Gaps = 3/222 (1%)
Strand=Plus/Plus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| || || ||| ||| ||| | ||||| || || |||||||||||||| |||
Sbjct 907753 AAAATG---CAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAAGTTGAA 907809
Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283
||||||||| | || || ||| ||||| ||||| || ||||| ||| ||
Sbjct 907810 TCTTCTGACACTATTGACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTATTCCTCCA 907869
Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343
||| |||||| | || || || || || || || ||||| ||||| ||| | | ||
Sbjct 907870 GACCAACAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCTGAC 907929
Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|||||| | || || || ||||| |||||| | || ||||||
Sbjct 907930 TACAACATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGA 907971
Score = 114 bits (126), Expect = 3e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
||||| || || |||||||||||||| ||| ||||||||| | || || |||
Sbjct 908464 ACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCTGACACTATTGATAATGTGAAGTCT 908523
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| |||||||| ||| || ||| |||||| | || || || || ||
Sbjct 908524 AAGATTCAAGATAAAGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCGGGTAAA 908583
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| || ||||| ||||| ||| | |||| |||||| |||| || || || || || |||
Sbjct 908584 CAATTAGAAGACGGAAGAACTCTATCCGACTACAACATCCAAAAGGAATCCACACTCCAC 908643
Query 206374 CTTGTTTTGAG 206384
| || |||||
Sbjct 908644 TTGGTCTTGAG 908654
Score = 113 bits (124), Expect = 1e-19
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
||||| || || |||||||||||||| ||| ||||||||| | || || |||
Sbjct 908008 ACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCTGACACTATTGACAATGTGAAGTCT 908067
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| ||| || ||| |||||| | || || || || ||
Sbjct 908068 AAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCGGGTAAA 908127
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| || ||||| ||||| ||| | | || |||||| | || || || ||||| ||||||
Sbjct 908128 CAATTAGAAGACGGAAGAACTCTATCTGACTACAACATTCAAAAGGAATCTACACTTCAC 908187
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 908188 TTAGTCTTGAGA 908199
Score = 113 bits (124), Expect = 1e-19
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
||||| || || |||||||||||||| ||| ||||||||| | || || ||
Sbjct 908236 ACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCTGACACTATTGACAATGTGAAATCT 908295
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| ||| || ||| |||||| | || || || || ||
Sbjct 908296 AAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCTGGTAAA 908355
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| || ||||| ||||| ||| | |||| |||||| | || || || ||||| ||||||
Sbjct 908356 CAATTAGAAGACGGAAGAACTCTATCCGACTACAACATTCAAAAGGAATCTACACTTCAC 908415
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 908416 TTAGTCTTGAGA 908427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820663721289
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |