Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq7 269 4e-67 seq3 221 2e-52 seq5 132 7e-26 >seq7 Length=940253 Score = 269 bits (298), Expect = 4e-67 Identities = 1370/2153 (64%), Gaps = 53/2153 (2%) Strand=Plus/Plus Query 68363 CCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATAC 68422 |||| || | || ||||| || | | ||||| | || || | ||| |||||||||| Sbjct 340292 CCTTGTCAATAGTGAACTGGATAGCGGCAGATGCAGCTTGAGTTCTTAGGTAGTACATAC 340351 Query 68423 CGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTG 68482 | || |||| ||| ||||||||||||||||||| || | || | ||| Sbjct 340352 CAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTG 340411 Query 68483 GATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCG 68542 | | || ||||| |||| |||||| ||||||||| |||| | | || || | Sbjct 340412 GGGCACGAATGTGAATGTTCAACGATTGGGATTGATCGATATAAGCAGCACGGTCAGCGG 340471 Query 68543 CCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATAT 68602 |||| | ||||| |||||| | |||||||||| |||||| | | | ||| | | Sbjct 340472 CCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAGTCTTTTAGCT 340531 Query 68603 CATCTGGAAGGCTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGA 68659 | | ||| | | | | ||||| || || ||| ||| | || || ||| | Sbjct 340532 CTTGTGGGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTTCA 340591 Query 68660 TCTCATCATTCCACAATTTTCTC-TCCGTTAAAACTCTAAGGAGATGCGGATTAACTATT 68718 | | |||| ||| ||| | || ||| | | || | | || || || ||| Sbjct 340592 TAGCTTCATCCCA-AATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGATT 340650 Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 || ||||| ||||||||||| | ||||| ||| || || || ||||| || | | | Sbjct 340651 TGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACAC 340710 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 || || | |||| ||||| | || || || |||||||| || || | ||| ||| Sbjct 340711 TCGTTGTAACCCAAGATTTGGGATGTGGAAGCGGTTGGCATTGGAGCGAGCAACAAAGAG 340770 Query 68839 TTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGAT 68898 ||||| ||||| ||| |||||| | | || | | | ||| ||||| || | || | Sbjct 340771 TTTCTTAGACCGTGTTGCTTGATTTCAGCCTTCAAGTTATCCCATTCCCATAGGTTAGTT 340830 Query 68899 GGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATAT 68958 || | ||| |||||| |||||| | || | | ||| || || | Sbjct 340831 GGGGTCTTACCCCATAGATCGAATTGTAACTTACCTTCAGATGCTGGAGAGCCTGGGAAA 340890 Query 68959 GTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAA 69018 | |||||| || ||||| | | || | ||| || || | ||||| | || Sbjct 340891 GATTCATATGGACCTTCTTCCTTTGCCAATTCCATGGAGGCTTCACAAGCACCATGGTAG 340950 Query 69019 ATTGTTTCGAAAATCTTCTTATTGAGATCT-TGTGCTTCTAGACTATCGAATGGATAATG 69077 || ||||| || || | || | |||| | ||||||| | || ||||| || | Sbjct 340951 ATAGTTTCAAAGATTTGGACGTTCA-ATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACG 341009 Query 69078 TAAAAGAATAAATGCATCTGCCAATCCCTGAAC-CCCAATACCGATAGGTCTATGTCTCT 69136 || | || || || || || || || ||||| |||||| | ||||||||||||||| Sbjct 341010 TAGCATCATGAAAGCGTCGGCTAAACCTTGAACACCCAATGCA-ATAGGTCTATGTCTCA 341068 Query 69137 TATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGAT 69196 | ||||| ||| ||| | || |||||||| ||| || || ||| | || | | Sbjct 341069 TGTTTGATCTTCTAGCAGTTTCAACTGGATAATAGTTACGGTCAATGATTCTGTTCAAGT 341128 Query 69197 TTCG-GACTACTACTT-----TAAC---CACGTCCTTTAGTTTGAGAAAATCAAATCGT- 69246 | || | | | ||| || | || | ||| | ||| | | | || | Sbjct 341129 TGCGAGTCAAAACCTTAGAGATATCGTGCAACTTCTTGAAGTTGT-AGGTTTGAGTCTTA 341187 Query 69247 CCATC------TATAACAA---ACATATTCAGTGCTACAGATGCTAGATTACAAACTGCT 69297 ||||| ||| ||| || || || | ||| || | |||||||| || Sbjct 341188 CCATCGTTTGATATTTCAATGAACGCTGGCAAAGCGATAGAAGCCAAGTTACAAACAGCG 341247 Query 69298 ACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTC 69357 || | | || | |||| | || || ||| | || | | |||||||| Sbjct 341248 GTTTCTTCTGGGTTAGAGTATTCAACGATTTCACAACACAAGTTCGAAGACTTGATAGTA 341307 Query 69358 CCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTA 69417 |||| || | ||||||||||| |||||||| || |||||||| || || || || ||| Sbjct 341308 CCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCATGAATGGGGTA 341367 Query 69418 CCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT--AGCATTTATTACGG 69475 |||||||| | |||| ||| | |||| | ||| | || | ||| || | | | Sbjct 341368 CCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGCCTTGA---CAG 341422 Query 69476 TCTTG-TA--ACG--CTTCTCTTTTTCATATTGT--GTATATAGCCGTTCGAATTCATCT 69528 |||| || ||| ||||||| | | || || ||| | || ||| |||||||| Sbjct 341423 TCTTTCTACCACGGCCTTCTCTCT--CGTAACGTTCGTACAATGC--TTCAAATTCATCA 341478 Query 69529 CCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCA 69588 || ||||||| || || || ||| |||||| | | ||| | ||| | || | Sbjct 341479 CCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTCGTTC 341538 Query 69589 TCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTT 69648 | || |||| ||||| || ||||| || ||||| || ||| || | ||||| | Sbjct 341539 TTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCTTGCA 341598 Query 69649 CTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGC 69708 | ||||||| || || || ||| | | |||| || || | ||||| || ||| Sbjct 341599 CGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGAGTGC 341658 Query 69709 CATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTAT 69768 ||||| || | || | || | | | || |||| || || || || || || | ||| Sbjct 341659 CATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAA 341718 Query 69769 CTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTT 69828 | |||||||| || | || | | ||| ||||||||||| ||||| |||| || || Sbjct 341719 CGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTA 341778 Query 69829 CCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCC 69888 |||| ||| ||| || | | ||||| || ||| | ||| || || || || Sbjct 341779 CCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCG 341838 Query 69889 ATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCT 69948 | |||||||| | ||||| ||||| ||||| || ||||| || ||| ||| || Sbjct 341839 GTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCC 341898 Query 69949 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAAT 70008 ||||| | || ||||| |||||||| |||| ||| || ||||| || | | Sbjct 341899 TTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGT 341958 Query 70009 GTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGAT 70068 || || || ||||| ||||| || || ||| | || ||||| ||||| | | | | Sbjct 341959 GTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTT 342018 Query 70069 TCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTC 70127 || ||||| | || | || || || | || || | ||| | ||| || ||||| ||||| Sbjct 342019 TCAATATCTCTACCG-TGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTC 342077 Query 70128 TACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATA 70187 | ||| || ||| | | || ||| || ||||| || || || || || || Sbjct 342078 AGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTA 342137 Query 70188 GTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGT 70247 |||| || || ||||| ||||| | ||| |||| || | |||| || | | | Sbjct 342138 GTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCTCCAT 342197 Query 70248 AACTATATCCATA-ACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAA 70306 || || | |||| || | || || || || || | ||||| | || || || | Sbjct 342198 GACGATGT-CATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTTTGGGTTGA 342256 Query 70307 CATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAAT 70366 | | || | || ||||| | || | ||| | || | |||| |||||| || | Sbjct 342257 CCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTGCAAGT 342316 Query 70367 TTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTA- 70425 | || ||||| ||||| || || | | |||| || || || || || || || ||| Sbjct 342317 TAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CATGTAG 342375 Query 70426 GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478 || | |||| ||||| || |||||||||| | ||| || || || | ||| Sbjct 342376 GCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 342428 >seq3 Length=1564943 Score = 221 bits (244), Expect = 2e-52 Identities = 591/885 (67%), Gaps = 20/885 (2%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| || || | || ||||| ||||| ||||| || |||| || || ||| Sbjct 416211 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 416152 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| || || || || ||||| | || || | ||| || ||||| | | Sbjct 416151 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 416092 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | ||| |||||||||||||| | |||| ||||||| ||| ||||| || | || Sbjct 416091 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 416032 Query 39506 TTAACTGGTAGAGCCTCCGTTA-GAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 ||| |||||||| || | | | | ||||||| |||| || || || ||||| || || Sbjct 416031 GAAACGGGTAGAGCGTCGATGAAGTATCTCTTTT-CGATCTCAACAGCTTCTGTGATGAT 415973 Query 39565 CGATGTTACTACCTCATCA-CTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623 | || | || | || | | | | | ||||| | || | || ||||| | Sbjct 415972 TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGGCAA 415914 Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683 |||| || | || |||||||| | ||| |||||||| || || || | || |||| Sbjct 415913 AGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCA 415854 Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743 | | ||| ||| || | ||| || |||||||| || || ||||| || || | |||| Sbjct 415853 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTT 415794 Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA----CTTGTATCATTATGTATCCA- 39798 | || || || || ||||| | ||| || |||| ||| |||| | | ||||| Sbjct 415793 CCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCG-TCATCACGAATCCAT 415735 Query 39799 CTTCTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGA 39857 || || ||||| | ||| || |||||| | || || ||||| || ||||| || | Sbjct 415734 CTAATG-GCCCATTGAGCCTT-TTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACA 415677 Query 39858 GATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTG 39917 | | | ||| | | ||| || | || || || || |||| ||| |||| | Sbjct 415676 AGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGG 415617 Query 39918 AATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTA 39977 | ||||||||||| ||| || || || ||||| ||||| | ||||| | |||||| | Sbjct 415616 AGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCA 415557 Query 39978 CCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAA 40037 |||| | | | || ||||| |||| ||||| ||||| || ||||| ||| ||||| | Sbjct 415556 CCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGA 415497 Query 40038 ATGCCAATACATGTTTA-ATAAAATATTTTTC-ATCGGGTGTCAAT---TTATTCCAGTC 40092 | || | || | | | || ||| || | || || || ||| | || |||||||| Sbjct 415496 ACGCAAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGT-TCATTCTGTTGTTCCAGTC 415439 Query 40093 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTT 40152 || | ||| || || | ||| | ||||||||| |||||||| || ||||| || | || Sbjct 415438 ATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTT 415379 Query 40153 GTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 || | ||| || || | || | ||||| |||| ||||| Sbjct 415378 ATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 415334 >seq5 Length=1351988 Score = 132 bits (146), Expect = 7e-26 Identities = 201/286 (70%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 69555 TTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATC 69614 ||||| ||||| | | ||||| | |||| || | ||| |||| |||||| ||||| Sbjct 97103 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 97044 Query 69615 GGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttt 69674 |||||||| ||||| ||| | |||| || || ||||||| ||||| ||| || Sbjct 97043 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 96984 Query 69675 tttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGAC 69734 | | || | | || || |||||||| |||||||||||| | ||||| | | | Sbjct 96983 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATACAAAAGGC 96924 Query 69735 TCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAG 69794 || || ||||| || || || ||||| | ||||| || ||||| ||| | || | ||| Sbjct 96923 ACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGCAG 96864 Query 69795 CATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 ||| |||| | |||||| || ||||||| | || || |||||| Sbjct 96863 CATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATAA 96818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908722722760