Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3 152 4e-32 >seq3 Length=1564943 Score = 152 bits (168), Expect = 4e-32 Identities = 303/441 (69%), Gaps = 12/441 (3%) Strand=Plus/Plus Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407 || || ||| | | ||| || || ||| ||| ||||||||||| || ||| || | || Sbjct 1156583 GGTCTCTTGTTGTTTGGTCCTCCAGGTACTGGTAAAACATTAATCGCAAGAAAAATCGGT 1156642 Query 19408 AAATTACTTACAAAACAACCTCCCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATA 19466 | | | | | | ||| ||||| ||||| || ||||| |||||| | | |||||| Sbjct 1156643 ACAATGTTGA-ATGCCAAAGAGCCAAAGATTGTTAACGGTCCAGAAATCCTCAGTAAATA 1156701 Query 19467 TGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAA 19526 ||| || || ||||||||| | || ||||| || ||||| | |||| | || Sbjct 1156702 TGTCGGCTCTTCAGAAGAAAATATCCGTAACTTGTTCAAGGATGCTGAGGCAGAATATAA 1156761 Query 19527 ACGTTTAGGGCGCAAAAG-TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCT 19585 | | |||| | | || ||| ||||||||||| || | ||||||||||| | | | Sbjct 1156762 A-GCCAAGGGTGAAGAATCTTCATTGCACATTATCATTTTCGATGAATTGGATTCTGTAT 1156820 Query 19586 GTAAGCAAAGAGGTTC---TGGT----GTAAATGGAGTACATGACACTGTTGTCAATCAA 19638 |||||||||||||| ||| ||| | || || |||| ||| || || ||| Sbjct 1156821 TCAAGCAAAGAGGTTCAAGAGGTGACGGTACA-GGCGTTGGAGACAATGTGGTTAACCAA 1156879 Query 19639 CTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACT 19698 | || | || | || |||||| ||||| | || ||||| || |||||||| |||||| Sbjct 1156880 TTGCTTGCTAAGATGGATGGTGTTGACCAATTAAACAATATATTGGTTATTGGTATGACT 1156939 Query 19699 AATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATC 19758 || | ||| || || || || ||||| ||||| || ||| | || ||| | || || Sbjct 1156940 AACCGTAAGGATTTGATTGATAGTGCCTTGTTACGTCCTGGTAGATTTGAAGTCCAGGTC 1156999 Query 19759 GAAATTAACTTACCCGATGAA 19779 |||||| | ||||| || ||| Sbjct 1157000 GAAATTCAATTACCAGACGAA 1157020 Score = 109 bits (120), Expect = 4e-19 Identities = 558/866 (64%), Gaps = 38/866 (4%) Strand=Plus/Plus Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767 ||||| | |||| || || || || ||| | || || | ||| |||| || ||||| Sbjct 415342 TTTCCCAATCAAGTACCACGAAATCTGGGAGGCTTATAAGAGAGCCGAGGCCTCTTTTTG 415401 Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGCATTAAAACCA 43825 ||| || |||||| | |||||| | || || ||| || | |||| || | || | Sbjct 415402 GACTGCTGAAGAAATCGATTTGTCCAAGGATCTT--CATGACTGGAA--CAACAGAATGA 415457 Query 43826 -CAAGAA--AAACATTTTATATCTTTGGTTT--TGGCGTTTTTTGCTGCGAGCGACGGGA 43880 | |||| | | ||||| |||| | | | ||||| |||||||| ||| || | Sbjct 415458 ACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTCTTTGCTGCTTCCGATGGTA 415517 Query 43881 TAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGAT 43940 | || || ||||| ||||| || | || || ||| | |||||||| | Sbjct 415518 TCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTGCAAATTCCAGAAGCCAAGT 415577 Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000 |||| || || || |||||| || ||||| || || || |||| || | ||| Sbjct 415578 GTTTCTACGGTTTCCAAATTATGATGGAAAACATCCACTCCGAAACTTATTCGTTGTTGA 415637 Query 44001 TAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056 | || || |||||||| ||| || || || | || ||||| ||||| || ||| Sbjct 415638 TTGACACTTACATCAAGGATCCTAAGGAACACGA--CTTC--TTGTTGAATGCCATTGAA 415693 Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGAT 44116 || | || || ||| | || || | |||||| ||| |||||| | | || Sbjct 415694 ACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGGATTCGTGATGACGAA 415753 Query 44117 TCTTTT---GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173 | | | ||| || | || ||||| || | |||||||| | || || || || Sbjct 415754 GCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGT 415813 Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233 || || || ||||| || ||||| ||||| ||||||||||| || ||||| || ||| Sbjct 415814 TCCTTCGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCA 415873 Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293 || || || || | | |||||||| || || ||| ||||| || ||| || || | Sbjct 415874 AACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTA-TTCCA 415932 Query 44294 TATCTAGGAGACGATAAGCC---TTCATGTAAGACAAT-TACAGATATTGTTGTAGAGGC 44349 | | | ||| | ||||| | || |||| | | ||| || | ||| || Sbjct 415933 TCATTTGAAGA--ACAAGCCAGATCCA---AAGATTGTCGAAAGA-ATCATCACAGAAGC 415986 Query 44350 AGTAAAGATAGAACAAGA-ATTTATGA-CAACAGCATTACCTGTAAATTTAATAGGAATG 44407 || |||| ||| |||| || | | | || || |||| || | || | || ||| Sbjct 415987 TGTTGAGATCGAA-AAGAGATACTTCATCGAC-GCTCTACCCGTTTCTCTATTGGGTATG 416044 Query 44408 AATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTG 44467 || | ||||||||||||||| | |||| ||||||| | |||| | | | Sbjct 416045 AACGCTGATTTGATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTA 416104 Query 44468 GGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTG 44527 ||| | | ||| |||| | || ||||| || || ||||||||||| ||||| ||| Sbjct 416105 GGTAACAAGAAATACTACAACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTG 416164 Query 44528 GAAGGCAAAACAAACTTTTTTGAAAA 44553 | || ||||| || || || ||||| Sbjct 416165 GCCGGTAAAACCAATTTCTTCGAAAA 416190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455956404045