Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq3 152 4e-32
>seq3
Length=1564943
Score = 152 bits (168), Expect = 4e-32
Identities = 303/441 (69%), Gaps = 12/441 (3%)
Strand=Plus/Plus
Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407
|| || ||| | | ||| || || ||| ||| ||||||||||| || ||| || | ||
Sbjct 1156583 GGTCTCTTGTTGTTTGGTCCTCCAGGTACTGGTAAAACATTAATCGCAAGAAAAATCGGT 1156642
Query 19408 AAATTACTTACAAAACAACCTCCCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATA 19466
| | | | | | ||| ||||| ||||| || ||||| |||||| | | ||||||
Sbjct 1156643 ACAATGTTGA-ATGCCAAAGAGCCAAAGATTGTTAACGGTCCAGAAATCCTCAGTAAATA 1156701
Query 19467 TGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAA 19526
||| || || ||||||||| | || ||||| || ||||| | |||| | ||
Sbjct 1156702 TGTCGGCTCTTCAGAAGAAAATATCCGTAACTTGTTCAAGGATGCTGAGGCAGAATATAA 1156761
Query 19527 ACGTTTAGGGCGCAAAAG-TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCT 19585
| | |||| | | || ||| ||||||||||| || | ||||||||||| | | |
Sbjct 1156762 A-GCCAAGGGTGAAGAATCTTCATTGCACATTATCATTTTCGATGAATTGGATTCTGTAT 1156820
Query 19586 GTAAGCAAAGAGGTTC---TGGT----GTAAATGGAGTACATGACACTGTTGTCAATCAA 19638
|||||||||||||| ||| ||| | || || |||| ||| || || |||
Sbjct 1156821 TCAAGCAAAGAGGTTCAAGAGGTGACGGTACA-GGCGTTGGAGACAATGTGGTTAACCAA 1156879
Query 19639 CTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACT 19698
| || | || | || |||||| ||||| | || ||||| || |||||||| ||||||
Sbjct 1156880 TTGCTTGCTAAGATGGATGGTGTTGACCAATTAAACAATATATTGGTTATTGGTATGACT 1156939
Query 19699 AATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATC 19758
|| | ||| || || || || ||||| ||||| || ||| | || ||| | || ||
Sbjct 1156940 AACCGTAAGGATTTGATTGATAGTGCCTTGTTACGTCCTGGTAGATTTGAAGTCCAGGTC 1156999
Query 19759 GAAATTAACTTACCCGATGAA 19779
|||||| | ||||| || |||
Sbjct 1157000 GAAATTCAATTACCAGACGAA 1157020
Score = 109 bits (120), Expect = 4e-19
Identities = 558/866 (64%), Gaps = 38/866 (4%)
Strand=Plus/Plus
Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767
||||| | |||| || || || || ||| | || || | ||| |||| || |||||
Sbjct 415342 TTTCCCAATCAAGTACCACGAAATCTGGGAGGCTTATAAGAGAGCCGAGGCCTCTTTTTG 415401
Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGCATTAAAACCA 43825
||| || |||||| | |||||| | || || ||| || | |||| || | || |
Sbjct 415402 GACTGCTGAAGAAATCGATTTGTCCAAGGATCTT--CATGACTGGAA--CAACAGAATGA 415457
Query 43826 -CAAGAA--AAACATTTTATATCTTTGGTTT--TGGCGTTTTTTGCTGCGAGCGACGGGA 43880
| |||| | | ||||| |||| | | | ||||| |||||||| ||| || |
Sbjct 415458 ACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTCTTTGCTGCTTCCGATGGTA 415517
Query 43881 TAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGAT 43940
| || || ||||| ||||| || | || || ||| | |||||||| |
Sbjct 415518 TCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTGCAAATTCCAGAAGCCAAGT 415577
Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000
|||| || || || |||||| || ||||| || || || |||| || | |||
Sbjct 415578 GTTTCTACGGTTTCCAAATTATGATGGAAAACATCCACTCCGAAACTTATTCGTTGTTGA 415637
Query 44001 TAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056
| || || |||||||| ||| || || || | || ||||| ||||| || |||
Sbjct 415638 TTGACACTTACATCAAGGATCCTAAGGAACACGA--CTTC--TTGTTGAATGCCATTGAA 415693
Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGAT 44116
|| | || || ||| | || || | |||||| ||| |||||| | | ||
Sbjct 415694 ACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGGATTCGTGATGACGAA 415753
Query 44117 TCTTTT---GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173
| | | ||| || | || ||||| || | |||||||| | || || || ||
Sbjct 415754 GCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGT 415813
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|| || || ||||| || ||||| ||||| ||||||||||| || ||||| || |||
Sbjct 415814 TCCTTCGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCA 415873
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
|| || || || | | |||||||| || || ||| ||||| || ||| || || |
Sbjct 415874 AACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTA-TTCCA 415932
Query 44294 TATCTAGGAGACGATAAGCC---TTCATGTAAGACAAT-TACAGATATTGTTGTAGAGGC 44349
| | | ||| | ||||| | || |||| | | ||| || | ||| ||
Sbjct 415933 TCATTTGAAGA--ACAAGCCAGATCCA---AAGATTGTCGAAAGA-ATCATCACAGAAGC 415986
Query 44350 AGTAAAGATAGAACAAGA-ATTTATGA-CAACAGCATTACCTGTAAATTTAATAGGAATG 44407
|| |||| ||| |||| || | | | || || |||| || | || | || |||
Sbjct 415987 TGTTGAGATCGAA-AAGAGATACTTCATCGAC-GCTCTACCCGTTTCTCTATTGGGTATG 416044
Query 44408 AATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTG 44467
|| | ||||||||||||||| | |||| ||||||| | |||| | | |
Sbjct 416045 AACGCTGATTTGATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTA 416104
Query 44468 GGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTG 44527
||| | | ||| |||| | || ||||| || || ||||||||||| ||||| |||
Sbjct 416105 GGTAACAAGAAATACTACAACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTG 416164
Query 44528 GAAGGCAAAACAAACTTTTTTGAAAA 44553
| || ||||| || || || |||||
Sbjct 416165 GCCGGTAAAACCAATTTCTTCGAAAA 416190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455956404045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |