Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 >seq2 Length=1688883 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||||| ||| ||||| || | || || || ||||| || ||||||||| Sbjct 908666 CCTCCTCTCAACCTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGAT 908607 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | ||||||| | |||||||| || |||| | | ||||| || || || Sbjct 908606 AGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGA 908547 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| |||||||| ||||| |||| | || | |||||| | | ||| ||| Sbjct 908546 ATACCTTCTTTATCTTGAATCTTAGACTTCACATTATCAATAGTGTCAGAAGATTCGACT 908487 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| |||| || || |||| ||| || || |||||||||||| Sbjct 908486 TCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 908439 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| | ||| || || || | ||||| || |||||||| ||||||||| Sbjct 908438 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 908379 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | ||||||| | |||||||| || |||| | | ||||| || || || Sbjct 908378 AGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 908319 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| || || || ||||| ||||| | || | |||||| | | ||| ||| Sbjct 908318 ATACCTTCCTTGTCTTGAATCTTAGATTTCACATTGTCAATAGTGTCAGAAGATTCGACT 908259 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| |||| || || |||| ||| || || |||||||||||| Sbjct 908258 TCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 908211 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || | ||| | ||| || || || | ||||| || |||||||| |||||||| | | Sbjct 907982 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCAGAT 907923 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 ||| | ||||||| | |||||||| || |||| | | ||||| || || || Sbjct 907922 AGAGTTCTTC-CGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGG 907864 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||| || ||||| |||||| |||| | || | |||||| | | |||||| Sbjct 907863 AATACCTTCCTTATCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAAC 907804 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| | ||| || | || || || | || || |||||||||||||| Sbjct 907803 TTCCAAAGTGATGGTCTTACCTGTTAACGTCTTGACAAAGATTTGCAT 907756 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || | ||| | ||| || || || | ||||| || |||||||| |||||||| | | Sbjct 908210 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCAGAT 908151 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 ||| | ||||||| | |||||||| || |||| | | ||||| || || || Sbjct 908150 AGAGTTCTTC-CGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGG 908092 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||| || || || ||||| |||| | || | |||||| | | ||| || Sbjct 908091 AATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGAC 908032 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| | ||| |||| || || |||| ||| || || |||||||||||| Sbjct 908031 TTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 907983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934353390008