Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq7 325 5e-84 seq3 113 6e-20 >seq7 Length=940253 Score = 325 bits (360), Expect = 5e-84 Identities = 924/1399 (66%), Gaps = 43/1399 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| | |||||||| || || || || || | |||||||||||| | ||||| Sbjct 340680 GTACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTGGA 340739 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || ||||||||||| || | ||| | | ||| | ||||| | | |||||| | Sbjct 340740 AGCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGC 340799 Query 110827 CTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTT-TCACCTTCCCACATGTCAAACTG 110883 ||| | |||||| || ||| | || | || | | ||| ||| | || || || Sbjct 340800 CTTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTCTTACC---CCATAGATCGAATTG 340856 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 | | |||| || || ||||| || || | |||||| | ||||| | | || Sbjct 340857 TAACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGC 340916 Query 110944 CAATTCACAGCTCGCCTC-CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002 |||||| | || || || | | | || || || ||||||||||| | | |||| Sbjct 340917 CAATTCCATGGAGGCTTCACAAGCAC-CATGGTAGATAGTTTCAAAGATTTGGACGTTCA 340975 Query 111003 -TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 |||| ||| |||| || || ||||||| | || || || || | || || | | Sbjct 340976 ATCTCTTTG-CTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAA 341034 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121 |||||||||||||| |||||||||| |||| ||| || || ||| ||||| ||||| Sbjct 341035 CCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACT 341094 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 |||||| | || | |||||||| || ||| | || || | || ||| | ||| || Sbjct 341095 GGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCG 341154 Query 111182 TG-AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT----TGACAT--------ACTT 111228 || || || || | | | | || |||||| ||| ||| || || Sbjct 341155 TGCAACTTCTTGA-AGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGC 341213 Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288 ||| | ||||| || ||||| || |||||||| || || || | | ||| || | Sbjct 341214 TGGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAAC 341273 Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348 ||||| ||| ||||| ||| ||| || || ||||| |||||||| ||||||||||| Sbjct 341274 GATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTT 341333 Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 ||| || ||||||||||| |||||| | || || || || || || || | || | || Sbjct 341334 GTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGAT 341393 Query 111409 AGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACT 111467 ||| | ||| ||| | | | || | ||| | | | || || || |||||| Sbjct 341394 AGCGTACCACAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGGCCTTCTCTCTCGTAAC 341452 Query 111468 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTG 111527 | ||| | |||||||| || ||||| | || | | |||||||| | || || Sbjct 341453 GTTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTG 341512 Query 111528 GACAGAAAAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || |||| | || ||| | | | ||| ||| || | |||||||||||| ||||| || Sbjct 341513 GAGAGAACAAAGTCCAAT--CTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGAT 341570 Query 111586 CCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 111644 ||| || | || || | |||| | ||| || ||||| | ||| ||||| || | Sbjct 341571 CCATAGTGCTGGGAACAAGTCTCTTGCACGGA-TTTCTTCCTTACCGTGGTTCTTTCTGA 341629 Query 111645 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAG 111698 || | ||| || | |||||| | |||||||||||| | || | |||| || Sbjct 341630 TGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAG 341689 Query 111699 ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758 || ||| | ||| |||| | || || || || ||| ||| || || |||| || Sbjct 341690 GTCTCTTGTTA---CCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCA 341746 Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818 ||||||||||||| | || ||| || || || ||| ||| | | | | Sbjct 341747 TTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAA 341806 Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878 | || ||||||| |||||||| ||||| ||| ||||| ||||| ||| | | Sbjct 341807 TGTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCA 341866 Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938 ||| | || ||||| | || || || ||||| |||| | ||||| || |||| Sbjct 341867 AAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACA 341926 Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 111998 | || || || |||||||||||||| || ||||| | ||||| |||| || ||| Sbjct 341927 TTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAA-GTATCTT 341985 Query 111999 -GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 | ||||| || ||| || ||||| || ||||| ||| |||||||| |||| Sbjct 341986 AGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACA 342045 Query 112058 GCGACCCGCATGAACATGT 112076 || || | ||||| ||||| Sbjct 342046 GCCACTCTCATGATCATGT 342064 >seq3 Length=1564943 Score = 113 bits (124), Expect = 6e-20 Identities = 350/529 (66%), Gaps = 21/529 (4%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | ||| ||||||| | |||| | ||| ||||||||| | ||| Sbjct 415918 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 415859 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 |||||| | |||| |||||||||||| | || || ||| || || ||||| || | Sbjct 415858 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACAC 415799 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATC-- 122834 ||| ||||| || ||||||| | | ||| ||| | || | ||| | |||| Sbjct 415798 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA-TAG---GGCTTCGTCATCAC 415743 Query 122835 -AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC-T 122892 || |||| | || ||||||| ||||| | | || ||| | |||| ||||| | Sbjct 415742 GAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCAT 415683 Query 122893 TCA--AATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAAT 122950 ||| || || | | | | || |||||| ||||| |||||||||| |||| Sbjct 415682 TCAACAAGAAGTCGTGTTCCTTAG---GATCCTTGATGTAAGTGTCAATCAACAACGAAT 415626 Query 122951 ATGTTTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCG 123009 | |||||| || | ||| ||| || ||| | ||||||| | ||||| Sbjct 415625 AAGTTTCGGAGTGGATGTTTTCCATCAT-AATTTGGAAACCGTAGAAACACTTGGCTTCT 415567 Query 123010 CTTATCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGAC 123069 || || |||||| | | || || | | || || || || |||||||| Sbjct 415566 GGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAA 415507 Query 123070 CCAGCAAAGAATGCCAGGA---TGTACTTTATGAATTTCT-TTTCATTTTCATTCAGGGT 123125 |||||||||| || || | || | | | ||| ||| ||| ||||||| | | Sbjct 415506 GCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTC-TGTT 415448 Query 123126 CTTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCAA 123174 |||||||| | |||||| ||||||||||| | |||||| ||||||||| Sbjct 415447 GTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAA 415399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031929346400