Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq7 325 5e-84
seq3 113 6e-20
>seq7
Length=940253
Score = 325 bits (360), Expect = 5e-84
Identities = 924/1399 (66%), Gaps = 43/1399 (3%)
Strand=Plus/Plus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| ||||| | |||||||| || || || || || | |||||||||||| | |||||
Sbjct 340680 GTACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTGGA 340739
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
|| ||||||||||| || | ||| | | ||| | ||||| | | |||||| |
Sbjct 340740 AGCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGC 340799
Query 110827 CTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTT-TCACCTTCCCACATGTCAAACTG 110883
||| | |||||| || ||| | || | || | | ||| ||| | || || ||
Sbjct 340800 CTTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTCTTACC---CCATAGATCGAATTG 340856
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943
| | |||| || || ||||| || || | |||||| | ||||| | | ||
Sbjct 340857 TAACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGC 340916
Query 110944 CAATTCACAGCTCGCCTC-CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002
|||||| | || || || | | | || || || ||||||||||| | | ||||
Sbjct 340917 CAATTCCATGGAGGCTTCACAAGCAC-CATGGTAGATAGTTTCAAAGATTTGGACGTTCA 340975
Query 111003 -TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061
|||| ||| |||| || || ||||||| | || || || || | || || | |
Sbjct 340976 ATCTCTTTG-CTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAA 341034
Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121
|||||||||||||| |||||||||| |||| ||| || || ||| ||||| |||||
Sbjct 341035 CCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACT 341094
Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181
|||||| | || | |||||||| || ||| | || || | || ||| | ||| ||
Sbjct 341095 GGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCG 341154
Query 111182 TG-AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT----TGACAT--------ACTT 111228
|| || || || | | | | || |||||| ||| ||| || ||
Sbjct 341155 TGCAACTTCTTGA-AGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGC 341213
Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288
||| | ||||| || ||||| || |||||||| || || || | | ||| || |
Sbjct 341214 TGGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAAC 341273
Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348
||||| ||| ||||| ||| ||| || || ||||| |||||||| |||||||||||
Sbjct 341274 GATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTT 341333
Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408
||| || ||||||||||| |||||| | || || || || || || || | || | ||
Sbjct 341334 GTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGAT 341393
Query 111409 AGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACT 111467
||| | ||| ||| | | | || | ||| | | | || || || ||||||
Sbjct 341394 AGCGTACCACAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGGCCTTCTCTCTCGTAAC 341452
Query 111468 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTG 111527
| ||| | |||||||| || ||||| | || | | |||||||| | || ||
Sbjct 341453 GTTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTG 341512
Query 111528 GACAGAAAAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585
|| |||| | || ||| | | | ||| ||| || | |||||||||||| ||||| ||
Sbjct 341513 GAGAGAACAAAGTCCAAT--CTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGAT 341570
Query 111586 CCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 111644
||| || | || || | |||| | ||| || ||||| | ||| ||||| || |
Sbjct 341571 CCATAGTGCTGGGAACAAGTCTCTTGCACGGA-TTTCTTCCTTACCGTGGTTCTTTCTGA 341629
Query 111645 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAG 111698
|| | ||| || | |||||| | |||||||||||| | || | |||| ||
Sbjct 341630 TGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAG 341689
Query 111699 ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758
|| ||| | ||| |||| | || || || || ||| ||| || || |||| ||
Sbjct 341690 GTCTCTTGTTA---CCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCA 341746
Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818
||||||||||||| | || ||| || || || ||| ||| | | | |
Sbjct 341747 TTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAA 341806
Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878
| || ||||||| |||||||| ||||| ||| ||||| ||||| ||| | |
Sbjct 341807 TGTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCA 341866
Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938
||| | || ||||| | || || || ||||| |||| | ||||| || ||||
Sbjct 341867 AAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACA 341926
Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 111998
| || || || |||||||||||||| || ||||| | ||||| |||| || |||
Sbjct 341927 TTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAA-GTATCTT 341985
Query 111999 -GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057
| ||||| || ||| || ||||| || ||||| ||| |||||||| ||||
Sbjct 341986 AGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACA 342045
Query 112058 GCGACCCGCATGAACATGT 112076
|| || | ||||| |||||
Sbjct 342046 GCCACTCTCATGATCATGT 342064
>seq3
Length=1564943
Score = 113 bits (124), Expect = 6e-20
Identities = 350/529 (66%), Gaps = 21/529 (4%)
Strand=Plus/Minus
Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717
|||||| || ||| | ||| ||||||| | |||| | ||| ||||||||| | |||
Sbjct 415918 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 415859
Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777
|||||| | |||| |||||||||||| | || || ||| || || ||||| || |
Sbjct 415858 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACAC 415799
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATC-- 122834
||| ||||| || ||||||| | | ||| ||| | || | ||| | ||||
Sbjct 415798 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA-TAG---GGCTTCGTCATCAC 415743
Query 122835 -AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC-T 122892
|| |||| | || ||||||| ||||| | | || ||| | |||| ||||| |
Sbjct 415742 GAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCAT 415683
Query 122893 TCA--AATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAAT 122950
||| || || | | | | || |||||| ||||| |||||||||| ||||
Sbjct 415682 TCAACAAGAAGTCGTGTTCCTTAG---GATCCTTGATGTAAGTGTCAATCAACAACGAAT 415626
Query 122951 ATGTTTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCG 123009
| |||||| || | ||| ||| || ||| | ||||||| | |||||
Sbjct 415625 AAGTTTCGGAGTGGATGTTTTCCATCAT-AATTTGGAAACCGTAGAAACACTTGGCTTCT 415567
Query 123010 CTTATCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGAC 123069
|| || |||||| | | || || | | || || || || ||||||||
Sbjct 415566 GGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAA 415507
Query 123070 CCAGCAAAGAATGCCAGGA---TGTACTTTATGAATTTCT-TTTCATTTTCATTCAGGGT 123125
|||||||||| || || | || | | | ||| ||| ||| ||||||| | |
Sbjct 415506 GCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTC-TGTT 415448
Query 123126 CTTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCAA 123174
|||||||| | |||||| ||||||||||| | |||||| |||||||||
Sbjct 415447 GTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAA 415399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031929346400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |