Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq7 221 1e-52
seq3 93.3 5e-14
>seq7
Length=940253
Score = 221 bits (244), Expect = 1e-52
Identities = 894/1398 (64%), Gaps = 29/1398 (2%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
|| || |||| ||||||||||| || ||||| |||| |||||||||||||| ||||||
Sbjct 340681 TACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTGGAA 340740
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| || ||||| || || | | | ||| | ||||| | || | | || ||
Sbjct 340741 GCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCC 340800
Query 118302 TTGAGAGCGTCCCAGTCG--TAGTTGAGCTTTG-TCTCCCCCTGCCACATATCAAACTGG 118358
|| | ||||| || ||| | || | | ||| ||| || | ||| || ||
Sbjct 340801 TTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTCTTACCC---CATAGATCGAATTGT 340857
Query 118359 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 118418
| |||||| || ||||| || || || | |||||||| || || ||| |||
Sbjct 340858 AACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGCC 340917
Query 118419 AATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475
||||| |||| || || || | || || || |||||||| || | | |||
Sbjct 340918 AATTCCATGGAG---GCTTCACAAGCACCATGGTAGATAGTTTCAAAGATTTGGACGTTC 340974
Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535
| | ||| || || || || ||||| | | || || || || | || || | |
Sbjct 340975 AATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAA 341034
Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACG 118595
||||| ||||| | |||| || | ||||||||| || || | | ||| || || ||
Sbjct 341035 CCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACT 341094
Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 118655
|||||| | || | || || | || || | || || | |||||| | ||| ||
Sbjct 341095 GGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCG 341154
Query 118656 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC--ATACTT--AGGAAGG-- 118709
|| | ||| | | | | | | |||||| ||| | ||| || | ||| |
Sbjct 341155 TGCAACTTCTTGAAGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGCT 341214
Query 118710 ------GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763
||||| || |||| ||||| |||| ||| || || | || ||| || |
Sbjct 341215 GGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACG 341274
Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823
||||| |||||||| ||| ||| || || ||||||||||||||||| ||| ||
Sbjct 341275 ATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTG 341334
Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883
||||| ||||||||||| |||||| |||| || || || || ||||| | | | |||
Sbjct 341335 TTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATA 341394
Query 118884 GCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTT 118943
|| | ||| | | ||| ||||| | | || || ||| |||||| |
Sbjct 341395 GCGTACCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGT 341454
Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 119003
||| | |||||||| || ||||| | |||| | |||||||| | | |||
Sbjct 341455 TCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGA 341514
Query 119004 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063
|||| | || ||| | | || ||| || | ||||||||| || |||||||||||
Sbjct 341515 GAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCAT 341574
Query 119064 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 119123
|| || | ||| | || | || |||||| | || || || | | ||
Sbjct 341575 AGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCG 341634
Query 119124 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACG 119182
| ||||| | |||||| | |||||| || || | ||||| |||| | ||| |
Sbjct 341635 ACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTC 341694
Query 119183 ACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATG 119240
| |||| | |||| || || | |||||| ||| || ||||||| |||||||||
Sbjct 341695 TTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATA 341754
Query 119241 ATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGG 119300
||||| | || || || || || ||| ||| | | | | | |||
Sbjct 341755 ATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGA 341814
Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360
||||||| ||||||||| || || ||| ||||| || || ||| | | | || ||
Sbjct 341815 ATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCG 341874
Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420
|| || || || || || || |||| | || | ||||| || |||||||| ||
Sbjct 341875 TAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGA 341934
Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT-GGGACAT 119479
|| |||||||| ||||| || ||||| | ||||| |||| || ||| | |||||
Sbjct 341935 TGAGGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAA-GTATCTTAGAGACAT 341993
Query 119480 CTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539
|| ||| || ||||| || ||| ||| ||||| ||||||| | || |
Sbjct 341994 TAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCT 342053
Query 119540 CATAAACATGTATTGGGG 119557
||| | ||||| ||| ||
Sbjct 342054 CATGATCATGTGTTGAGG 342071
>seq3
Length=1564943
Score = 93.3 bits (102), Expect = 5e-14
Identities = 347/531 (65%), Gaps = 25/531 (5%)
Strand=Plus/Minus
Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074
|||||| || ||| | ||| || || | | | || | ||| || |||||| || |||
Sbjct 415918 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 415859
Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134
|||||| | |||| ||||||||||||||| || ||| || || |||||||| || |
Sbjct 415858 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACAC 415799
Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATC-- 130191
|| ||||| |||||||||| | | ||||| | | ||| ||| || |||
Sbjct 415798 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGC---GTATAGGG-CTTCGTCATCAC 415743
Query 130192 -AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-T 130249
|| ||| | || ||||| || ||||||| | ||| || | ||| | || || |
Sbjct 415742 GAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCAT 415683
Query 130250 TCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAAT 130307
||| |||| || | || || | ||||| |||||||| | || || | ||||
Sbjct 415682 TCAACAAGAAGTCGT--GTTCCTTA-GGATCCTTGATGTAAGTGTCAATCAACAACGAAT 415626
Query 130308 ATGTTTCGCCATGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCG 130366
| |||||| |||| ||| ||| || || || |||||||| | |||||
Sbjct 415625 AAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAAC-CGTAGAAACACTTGGCTTCT 415567
Query 130367 CTTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGAC 130426
|| || |||||| | | || || | | || || || || ||||||||
Sbjct 415566 GGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAA 415507
Query 130427 CCAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GG 130480
||||||| ||||| || | | | | | ||| || || |||||||||| |
Sbjct 415506 GCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTC---TCGTTCTCGTTCATTCTG 415450
Query 130481 GTCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAA 130531
| |||||||| | ||||||||| || | ||| | || || |||||||||
Sbjct 415449 TTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAA 415399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435130426040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |