Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq7 221 1e-52 seq3 93.3 5e-14 >seq7 Length=940253 Score = 221 bits (244), Expect = 1e-52 Identities = 894/1398 (64%), Gaps = 29/1398 (2%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || || |||| ||||||||||| || ||||| |||| |||||||||||||| |||||| Sbjct 340681 TACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTGGAA 340740 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || ||||| || || | | | ||| | ||||| | || | | || || Sbjct 340741 GCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCC 340800 Query 118302 TTGAGAGCGTCCCAGTCG--TAGTTGAGCTTTG-TCTCCCCCTGCCACATATCAAACTGG 118358 || | ||||| || ||| | || | | ||| ||| || | ||| || || Sbjct 340801 TTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTCTTACCC---CATAGATCGAATTGT 340857 Query 118359 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 118418 | |||||| || ||||| || || || | |||||||| || || ||| ||| Sbjct 340858 AACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGCC 340917 Query 118419 AATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 ||||| |||| || || || | || || || |||||||| || | | ||| Sbjct 340918 AATTCCATGGAG---GCTTCACAAGCACCATGGTAGATAGTTTCAAAGATTTGGACGTTC 340974 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535 | | ||| || || || || ||||| | | || || || || | || || | | Sbjct 340975 AATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAA 341034 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACG 118595 ||||| ||||| | |||| || | ||||||||| || || | | ||| || || || Sbjct 341035 CCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACT 341094 Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 118655 |||||| | || | || || | || || | || || | |||||| | ||| || Sbjct 341095 GGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCG 341154 Query 118656 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC--ATACTT--AGGAAGG-- 118709 || | ||| | | | | | | |||||| ||| | ||| || | ||| | Sbjct 341155 TGCAACTTCTTGAAGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGCT 341214 Query 118710 ------GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 ||||| || |||| ||||| |||| ||| || || | || ||| || | Sbjct 341215 GGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACG 341274 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 ||||| |||||||| ||| ||| || || ||||||||||||||||| ||| || Sbjct 341275 ATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTG 341334 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 ||||| ||||||||||| |||||| |||| || || || || ||||| | | | ||| Sbjct 341335 TTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATA 341394 Query 118884 GCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTT 118943 || | ||| | | ||| ||||| | | || || ||| |||||| | Sbjct 341395 GCGTACCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGT 341454 Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 119003 ||| | |||||||| || ||||| | |||| | |||||||| | | ||| Sbjct 341455 TCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGA 341514 Query 119004 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063 |||| | || ||| | | || ||| || | ||||||||| || ||||||||||| Sbjct 341515 GAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCAT 341574 Query 119064 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 119123 || || | ||| | || | || |||||| | || || || | | || Sbjct 341575 AGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCG 341634 Query 119124 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACG 119182 | ||||| | |||||| | |||||| || || | ||||| |||| | ||| | Sbjct 341635 ACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTC 341694 Query 119183 ACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATG 119240 | |||| | |||| || || | |||||| ||| || ||||||| ||||||||| Sbjct 341695 TTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATA 341754 Query 119241 ATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGG 119300 ||||| | || || || || || ||| ||| | | | | | ||| Sbjct 341755 ATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGA 341814 Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360 ||||||| ||||||||| || || ||| ||||| || || ||| | | | || || Sbjct 341815 ATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCG 341874 Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420 || || || || || || || |||| | || | ||||| || |||||||| || Sbjct 341875 TAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGA 341934 Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT-GGGACAT 119479 || |||||||| ||||| || ||||| | ||||| |||| || ||| | ||||| Sbjct 341935 TGAGGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAA-GTATCTTAGAGACAT 341993 Query 119480 CTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539 || ||| || ||||| || ||| ||| ||||| ||||||| | || | Sbjct 341994 TAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCT 342053 Query 119540 CATAAACATGTATTGGGG 119557 ||| | ||||| ||| || Sbjct 342054 CATGATCATGTGTTGAGG 342071 >seq3 Length=1564943 Score = 93.3 bits (102), Expect = 5e-14 Identities = 347/531 (65%), Gaps = 25/531 (5%) Strand=Plus/Minus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| | ||| || || | | | || | ||| || |||||| || ||| Sbjct 415918 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 415859 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 |||||| | |||| ||||||||||||||| || ||| || || |||||||| || | Sbjct 415858 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACAC 415799 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATC-- 130191 || ||||| |||||||||| | | ||||| | | ||| ||| || ||| Sbjct 415798 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGC---GTATAGGG-CTTCGTCATCAC 415743 Query 130192 -AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-T 130249 || ||| | || ||||| || ||||||| | ||| || | ||| | || || | Sbjct 415742 GAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCAT 415683 Query 130250 TCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAAT 130307 ||| |||| || | || || | ||||| |||||||| | || || | |||| Sbjct 415682 TCAACAAGAAGTCGT--GTTCCTTA-GGATCCTTGATGTAAGTGTCAATCAACAACGAAT 415626 Query 130308 ATGTTTCGCCATGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCG 130366 | |||||| |||| ||| ||| || || || |||||||| | ||||| Sbjct 415625 AAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAAC-CGTAGAAACACTTGGCTTCT 415567 Query 130367 CTTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGAC 130426 || || |||||| | | || || | | || || || || |||||||| Sbjct 415566 GGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAA 415507 Query 130427 CCAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GG 130480 ||||||| ||||| || | | | | | ||| || || |||||||||| | Sbjct 415506 GCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTC---TCGTTCTCGTTCATTCTG 415450 Query 130481 GTCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAA 130531 | |||||||| | ||||||||| || | ||| | || || ||||||||| Sbjct 415449 TTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAA 415399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435130426040