Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq2 147 2e-30
seq5 141 1e-28
seq7 134 2e-26
seq3 123 3e-23
>seq2
Length=1688883
Score = 147 bits (162), Expect = 2e-30
Identities = 161/214 (75%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||||||||||||| | || || ||||| || ||| | || ||||| ||
Sbjct 907755 AATGCAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAAGTTGAATCTTC 907814
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | |||| ||| ||||| |||| || || || ||||| || ||||||||||||||
Sbjct 907815 TGACACTATTGACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTATTCCTCCAGACCA 907874
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | | |||||||| ||||| ||| | || || | | || ||| | ||||| ||
Sbjct 907875 ACAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCTGACTACAA 907934
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| ||||||||||| || ||||| ||||||||
Sbjct 907935 CATTCAAAAGGAATCTACACTTCACTTAGTCTTG 907968
Score = 145 bits (160), Expect = 9e-30
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| | || || |||||||| ||| | || || || || |
Sbjct 907984 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 908043
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| ||||| |||| ||||| |||||||| || ||||||||||||||
Sbjct 908044 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 908103
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||| ||||| ||| | || || | | || ||| | ||||| ||
Sbjct 908104 CAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCTGACTACAAC 908163
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| ||||||||||| || ||||| ||||||||
Sbjct 908164 ATTCAAAAGGAATCTACACTTCACTTAGTCTTG 908196
Score = 145 bits (160), Expect = 9e-30
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| | || || |||||||| ||| | || || || || |
Sbjct 908212 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 908271
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| |||| |||| ||||| |||||||| || ||||||||||||||
Sbjct 908272 GACACTATTGACAATGTGAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 908331
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||||||||| ||| | || || | | || ||| | ||||| ||
Sbjct 908332 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 908391
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| ||||||||||| || ||||| ||||||||
Sbjct 908392 ATTCAAAAGGAATCTACACTTCACTTAGTCTTG 908424
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| | || || |||||||| ||| | || || || || |
Sbjct 908440 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 908499
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| ||||| |||| ||||| || || || || ||||||||||||||
Sbjct 908500 GACACTATTGATAATGTGAAGTCTAAGATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 908559
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||| ||||| ||| | || || | | || ||| | ||||| ||
Sbjct 908560 CAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 908619
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||||||||| || || | ||||||
Sbjct 908620 ATCCAAAAGGAATCCACACTCCACTTGGTCTTG 908652
>seq5
Length=1351988
Score = 141 bits (156), Expect = 1e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || || || ||||||||||| | || || || ||
Sbjct 1201012 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 1201071
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| |||| || || |||||||| || ||||||||||||||
Sbjct 1201072 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1201131
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || |||| | | || | | ||||| ||
Sbjct 1201132 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 1201191
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| || ||||| | ||||||
Sbjct 1201192 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTG 1201224
>seq7
Length=940253
Score = 134 bits (148), Expect = 2e-26
Identities = 517/803 (64%), Gaps = 17/803 (2%)
Strand=Plus/Plus
Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009
|| |||||||| ||||| || |||||||| || ||||||| ||| || || || |
Sbjct 341269 TCAACGATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTC 341328
Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069
|| ||| ||||| |||||||| |||| | |||||||| || ||| || | |
Sbjct 341329 TTCTTGTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCC 341388
Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACA 81129
| ||| |||| ||| | || | |||||||| ||| | |||||| | |
Sbjct 341389 AAGATAGCGTACCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCG 341448
Query 81130 TACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189
|| |||| | | || || | |||||| || || | | | |||| |||
Sbjct 341449 TAACGTTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCG 341508
Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGG 81249
|| || | | || ||| || || ||||| || |||||||||| || |||
Sbjct 341509 TTTGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGG 341568
Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCG 81308
||||| || || | ||||| ||| | ||| || || || | ||| ||||| |
Sbjct 341569 ATCCATAGTGCTGGGAACAAGTCTCTTGCA-CGGATTTCTTCCTTACCGTGGTTCTTTCT 341627
Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC- 81366
| |||| ||||| | ||| || | ||||||||||| | |||| ||||| | ||
Sbjct 341628 GATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACC 341687
Query 81367 ----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAA 81422
| |||| | ||||| |||| |||||||| ||||| ||| || ||||| |
Sbjct 341688 AGGTCTCTTGTTA---CCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAAT 341744
Query 81423 CATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482
||| || || ||||| | || |||||| ||||| | || || || | | ||
Sbjct 341745 CATTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACG 341804
Query 81483 CACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541
| ||| ||| || | ||| || ||||| | ||| || ||| ||||| |
Sbjct 341805 AATGTTG-TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCT 341863
Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601
||| || || ||||| || || ||| ||||| |||||| | | | |||||| ||
Sbjct 341864 TCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATG 341923
Query 81602 ACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659
|||| || || | ||| || |||||||| |||||||| | ||||| |||| ||
Sbjct 341924 ACATTTGTGG--ATGAGGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTA 341981
Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719
| ||||| |||| || |||||| || | |||||| |||||| |||||
Sbjct 341982 TCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACC 342041
Query 81720 GATAGCTACACGCATAAACATGT 81742
|| ||| || | ||| | |||||
Sbjct 342042 GACAGCCACTCTCATGATCATGT 342064
>seq3
Length=1564943
Score = 123 bits (136), Expect = 3e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| | || || ||||| || ||| | || || || || ||| | ||||
Sbjct 1518626 TTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCATT 1518567
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || ||||| |||||||| || ||||| |||||||| || | |
Sbjct 1518566 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTG 1518507
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || || | | | || | | ||||| || ||||||||
Sbjct 1518506 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAAG 1518447
Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||| ||||| | |||||| | || | |||||
Sbjct 1518446 GAATCCACCCTTCACTTGGTCTTGAGACTAAGAGGTGG 1518409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310335840080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |