Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq5 129 1e-24
seq3 129 1e-24
seq2 129 1e-24
>seq5
Length=1351988
Score = 129 bits (142), Expect = 1e-24
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | |||||| || || || ||||||||||| || || | | || || ||
Sbjct 1201227 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 1201168
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || || ||||| | | ||||||||| ||||||| ||||||||
Sbjct 1201167 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 1201108
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || |||||||| || ||| || || | || ||
Sbjct 1201107 GTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 1201048
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || ||||| || || | |||||
Sbjct 1201047 AGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1201012
>seq3
Length=1564943
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||| | ||| | |||||| ||||| || ||||||||||| || || | | || ||
Sbjct 1518418 AGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTA 1518477
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| ||||||| ||||| || || ||||| | | ||||||||| || |||| ||||||
Sbjct 1518478 CCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 1518537
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||| || ||||| || || || || ||||||||||| ||| || || | ||||
Sbjct 1518538 TTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTG 1518597
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| || || | ||||| || ||
Sbjct 1518598 ATGGTCTTACCAGTCAAGGTCTTGACGAA 1518626
>seq2
Length=1688883
Score = 129 bits (142), Expect = 1e-24
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | |||||| || || || ||||| ||||| || || | || || |||||
Sbjct 908427 TCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCC 908368
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||| | || || || || || || | | ||||||||| ||||||| ||||||||
Sbjct 908367 GTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 908308
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || ||||| |||||| || || || |||||||| ||| || || | ||||||
Sbjct 908307 GTCTTGAATCTTAGATTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGAT 908248
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| || || | |||||
Sbjct 908247 AGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 908212
Score = 123 bits (136), Expect = 6e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | |||||| || || || ||||| ||||| || || | || || |||||
Sbjct 908199 TCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCAGATAGAGTTCTTCC 908140
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||| | || || || || || || | | ||||||||| ||||||| ||||||||
Sbjct 908139 GTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 908080
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || ||||| ||||| || || || |||||||| ||| || || | ||||||
Sbjct 908079 GTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGAT 908020
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| || || | |||||
Sbjct 908019 AGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 907984
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||| | ||| || ||||| || ||||||||||| || || | || || ||||| |||||
Sbjct 908649 GACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTC 908590
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
| || || || || || || | | ||||||||| ||||||| ||||| || || ||
Sbjct 908589 TAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCTTG 908530
Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084
||||| ||||| || || || |||||||| ||| || || | |||||| |||||
Sbjct 908529 AATCTTAGACTTCACATTATCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTT 908470
Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || | |||||| || || | |||||
Sbjct 908469 ACCTGTCAAAGTCTTGACGAAGATTTGCAT 908440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151866335285
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |